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. 2020 Aug 20;57(12):4941–4951. doi: 10.1007/s12035-020-02058-2

Table 1.

Network and functional analyses of differentially expressed genes found only in the AD mouse blood

Top canonical pathways
Name P value Overlap
1 3-phosphoinositide degradation 1.12E-03 6.2% 9/146
2 Primary immunodeficiency signaling 3.18E-03 11.4% 4/35
3 D-myo-inositol-5-phosphate metabolism 4.49E-03 5.4% 8/147
4 Superpathway of inositol phosphate compounds 6.11E-03 4.8% 9/188
5 3-Phosphoinositide biosynthesis 6.38E-03 5.1% 8/156
Top upstream regulators
Name P value Predicted activation
1 IL3 3.85E-07
2 IL21 1.38E-05 Inhibited
3 IL15RA 1.69E-05
4 IFNA2 4.21E-05 Inhibited
5 TLN1 5.55E-05
Causal network
Name P value Predicted activation
1 MAP3K13 4.93E-07 Inhibited
2 Interferon beta-1a 5.66E-07
3 TLR7 6.02E-07 Inhibited
4 KAT7 7.48E-07 Activated
5 Androgen-AR 2.10E-06 Inhibited
Top diseases and bio functions
Diseases and disorders
Name P value range Number of molecules
1 Cancer 9.16E-03–5.36E-06 287
2 Hematological disease 8.80E-03–5.36E-06 106
3 Immunological disease 8.80E-03–5.36E-06 131
4 Organismal injury and abnormalities 9.27E-03–5.36E-06 291
5 Inflammatory response 6.92E-03–2.02E-05 46
Molecular and cellular functions
Name P value range Number of molecules
1 Cellular development 9.27E-03–5.57E-07 111
2 Cellular growth and proliferation 9.27E-03–5.57E-07 113
3 Cell death and survival 9.18E-03–4.80E-06 117
4 Cell cycle 9.18E-03–4.80E-06 63
5 Cell-to-cell signaling and interaction 9.27E-03–2.02E-05 59
Physiological system development and function
Name P value range Number of molecules
1 Hematological system development and function 9.27E-03–4.13E-08 84
2 Hematopoiesis 9.27E-03–4.13E-08 54
3 Tissue development 9.27E-03–5.57E-07 75
4 Embryonic development 9.27E-03–6.04E-06 57
5 Lymphoid tissue structure and development 9.27E-03–6.04E-06 60