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. 2020 Sep 2;287(1934):20200820. doi: 10.1098/rspb.2020.0820

Table 1.

Summary of key terms used within this study and a description of their implementation within the mathematical models. Full details on the mathematical implementation of each mechanism are given in the electronic supplementary material.

mechanism biological definition model representation
vertical transmission (VT) the passage of the microbe from the host mother (sometimes the father) to its offspring a percentage of offspring from carrier mothers inherit the microbe
environmental acquisition asocial acquisition of independently proliferating microbes available in the environment, habitat and/or host diet a probability that non-carrying individuals acquire the microbe following birth but prior to sexual maturity. Independent of population-level carrier density; this is a steady-state characteristic within the models
horizontal transmission (HT) the non-vertical passage of microbes among hosts, may include larval conspecific feeding or sexual transmission a probability of carriers transmitting to non-carriers, calculated as a multiple of the total carrier frequency; therefore, HT is dependent on population-level carrier density
mixed modes of transmission (MMT) any combination of transmission modes including VT, HT and environmental acquisition by which microbes can be acquired by hosts any stable carrier frequency which occurs because of more than one (exclusive) mechanism of microbial transmission
fitness measured as individual reproductive success, and equal to the contribution to the gene pool of the next generation made by individuals of the specified genotype/phenotype the probability of an individual surviving to sexual maturity relative to the non-carrier level (0.5 means half the number of individuals survive, whereas 2 indicates twice as many individuals survive)
dispersal when individuals move from one site to another to mature or breed a percentage (2%) of each population is exchanged at random each generation; this occurs following uptake/acquisition and fitness but prior to mating
host mate choice the process that occurs whenever the effects of traits expressed in one sex lead to non-random matings with the opposite sex; either (i) assortative mating, i.e. preference for similar characteristics (microbial carrier/ non-carrier), or (ii) preference for a consistent phenotype, i.e. for microbial carriers n-choice framework—the choosing sex samples n potential mates; if a preferred type is found, then mating occurs or else mating is with the n-th sampled individual