Table 1. Sampling of HBV/E sequences from different countries and percentages of clustering.
Country of Sampling | Number of sequences | Number of clustered sequences | Number of monophyletic clusters | Percentage of clustering (%) |
---|---|---|---|---|
Angola | 18 | - | - | - |
Argentina | 2 | - | - | - |
Belgium | 6 | 2 | 1 | 33.3 |
Benin | 4 | - | - | - |
Burkina Faso | 10 | - | - | - |
Cameroon | 29 | 23 | 4 | 79.3 |
Cape Verde | 7 | - | - | - |
Central African Republic | 29 | 14 | 6 | 48.3 |
Colombia | 2 | 2 | 1 | 100.0 |
Cuba | 2 | - | - | - |
Democratic Republic of the Congo | 4 | 4 | 1 | 100.0 |
Egypt | 2 | 2 | 1 | 100.0 |
Ethiopia | 1 | - | - | - |
Ghana | 15 | 9 | 4 | 60.0 |
Guinea | 78 | 37 | 14 | 47.4 |
Japan | 1 | - | - | - |
Liberia | 6 | 4 | 2 | 66.7 |
Madagascar | 1 | - | - | - |
Martinique | 1 | - | - | - |
Mexico | 1 | - | - | - |
Namibia | 6 | 4 | 1 | 66.7 |
Niger | 15 | 5 | 2 | 33.3 |
Nigeria | 51 | 27 | 9 | 52.9 |
Saudi Arabia | 3 | - | - | - |
Senegal | 1 | - | - | - |
Somalia | 1 | - | - | - |
South Africa | 2 | 2 | 1 | 100.0 |
Sudan | 15 | 10 | 2 | 66.7 |
United Kingdom | 5 | 3 | 1 | 60.0 |
Total | 318 | 148 | 50 | 46.5 |
The table shows the different countries of sampling of HBV/E sequences, the number of sequences sampled from each one of the countries, the number of samples that clustered and the corresponding number of sequences that clustered for each country as a percentage.