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. Author manuscript; available in PMC: 2021 Oct 6.
Published in final edited form as: Structure. 2020 Jun 30;28(10):1114–1123.e4. doi: 10.1016/j.str.2020.04.005

Table 2.

Buried surface area on the HA of various subtypes.

Buried surface area on the HA (A2)
Strain C05 IgG C05 d1 C05 truncated d4
H1 A/Solomon Islands/03/2006 639 638 586
H1 A/California/04/2009 777 580 569
H1 A/Puerto Rico/8/1934 734 720 593
H2A/Japan/305/1957 753 596 800
H2A/Singapore/1/1957 731 666 634
H3A/Perth/16/2009 780 686 614
H3 A/Hong Kong/1/1968 651 568 609
H4 A/duck/Czechoslovakia/1956 760 597 628
H7A/Shanghai/02/2013 742 588 534
Average 730 627 618

Mock co-complexes of C05 IgG with each subtype were created by aligning the HA structure to antigen in the co-crystal structure of C05 (PDB ID 4fp8). Peptides C05 d1 and C05 truncated d4 were docked into the receptor-binding site of each HA and the buried surface area of the lowest energy model was calculated.