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. Author manuscript; available in PMC: 2021 Oct 6.
Published in final edited form as: Structure. 2020 Aug 11;28(10):1124–1130.e5. doi: 10.1016/j.str.2020.07.012

KEY RESOURCES TABLE.

REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies
Rosetta sequence 1203 designed antibody This study N/A
Rosetta sequence 16996 designed antibody This study N/A
Rosetta sequence 8200 designed antibody This study N/A
Rosetta sequence 7969 designed antibody This study N/A
Rosetta sequence 18444 designed antibody This study N/A
Rosetta sequence 4492 designed antibody This study N/A
Rosetta sequence 11225 designed antibody This study N/A
Rosetta sequence 3083 designed antibody This study N/A
Rosetta sequence 10961 designed antibody This study N/A
Rosetta sequence 17038 designed antibody This study N/A
Rosetta sequence 12374 designed antibody This study N/A
Rosetta sequence 13458 designed antibody This study N/A
Rosetta sequence 9987 designed antibody This study N/A
Rosetta sequence 14857 designed antibody This study N/A
Rosetta sequence 3342 designed antibody This study N/A
CH65 (recombinant CHO-produced IgG1) Based on sequence in PDB ID: 5UGY N/A
CH67 (recombinant CHO-produced IgG1) Based on sequence in PDB ID: 4HKX N/A
CH65:1203d4 Chimera; incorporating Rosetta designed HCDR3 1203d4 into a backbone of CH65 This study N/A
CH65:7969d2 Chimera; incorporating Rosetta designed HCDR3 7969d2 into a backbone of CH65 This study N/A
CH67:1203d4 Chimera; incorporating Rosetta designed HCDR3 1203d4 into a backbone of CH67 This study N/A
CH67:7969d2 Chimera; incorporating Rosetta designed HCDR3 7969d2 into a backbone of CH67 This study N/A
CH65 V106D mutant antibody This study N/A
Anti-influenza nucleoprotein mouse antibodies BEI Resources Cat# NR-4282
Anti-mouse IgG AP conjugated antibodies Novex, DKXMO AP AFFINITY Cat# A16014
Goat F(ab′)2 anti-human lambda light chain horseradish peroxidase conjugate Southern Biotech Cat# 2072-05
Bacterial and Virus strains
Influenza A Virus, A/Solomon Islands/3/2006 (H1N1) Biodefense and Emerging Infections Research Resources Repository [BEI Resources] Cat# NR-41798
Chemicals, Peptides, and Recombinant Proteins
1-Step Ultra TMB-ELISA ThermoFisher Cat# 34029
Freestyle 293 expression medium ThermoFisher Cat# 12338002
ExpiCHO Expression Medium ThermoFisher Cat# A2910001
Fetal Bovine Serum, ultra-low IgG ThermoFisher Cat# 16250078
Dulbecco’s Modified Eagle Medium Invitrogen Cat# 11965
HiTrap TALON crude column GE Life Sciences Cat# 28953766
Deposited Data
Crystal structure of apo Fab CH65:7969d2 This paper PDB: 6DLA
Crystal structure of apo Fab CH65:1203d4 This paper PDB: 6DLB
Crystal structure of apo Fab CH67:1203d4 This paper PDB: 6DL8
Crystal structure of CH65 in complex with SI06 HA Whittle et al., 2011 PDB ID: 5UGY
Crystal structure of CH67 in complex with SI06 HA Schmidt et al., 2013 PDB ID: 4HKX
Crystal structure of apo CH65 Lee et al., 2015 PDB ID: 4WUK
Crystal structure of apo CH67 Schmidt et al., 2013 PDB ID: 4HKB
Experimental Models: Cell Lines
EBY-100 yeast cells ATCC Cat# MYA-4941
Hamster: ExpiCHO-S ThermoFisher Cat# A29127
Human: FreeStyle 293F ThermoFisher Cat# R79007
Madin Darby Canine Kidney Cell line ATCC Cat# CCL-34
Recombinant DNA
Heavy-chain BIOMED-2 variable antibody gene-specific primers Genscript N/A; Custom synthesis
TruSeq Library Preparation Kit Illumina Cat# RS-122-2001
MiSeq PE-300 v3 reagent kit Illumina Cat# MS-102-3001
Plasmids: Fab heavy chain or lambda chain expression vectors Genscript N/A; Custom synthesis
Software and Algorithms
Prism 7 GraphPad N/A
FlowJo 10 FlowJo 10 N/A
UCSF Chimera University of California N/A
PyMOL Schrödinger N/A; PyMOL version 2.3
Other
iQue Screener Plus flow cytometer iQue Screener Plus flow cytometer N/A
Synergy H1 microplate reader Synergy H1 microplate reader N/A
EL406 washer dispenser EL406 washer dispenser N/A
Anti-CH1 CaptureSelect column ThermoFisher Cat# 19432001L
MiSeq instrument MiSeq instrument N/A
Octet RED instrument Octet RED instrument N/A