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. 2020 Sep 28:1–24. doi: 10.1080/07391102.2020.1824814

Table 3.

In-depth amino-acid residues interactions exhibited by the co-crystal ligand and Top-3 compounds against the target PDB-6Y2F.

S.no Compound Code Hydrogen bond with distances (Å) Aromatic bond with distance (Å) Glide score (Kcal/mol)
1 SN00293542(1st) ASN-142 (2.62), GLY-143 (1.75), SER-144 (2.21), HIE-163 (2.09), HIE-164 (2.66), GLU-166 (2.32), THR-45 (2.77), SER-46 (2.40), GLN-189 (2.03), H20 (2.77,2.43, 2.05) −14.565
2 SN00334894(2nd) SER-46 (2.21), ASN-142 (2.22), GLY-143 (2.14), THR-24 (1.94, 2.62), HIE-164 (1.50, 1.95), H20 (1.74,2.44) −13.780
3 SN00213037(3rd) HIE-164(1.74), ASN-142 (1.65), GLY-143(2.32), CYS-145(2.20), H20 (2.40,2.08,1.93,1.63) −13.322
4 Co-crystal ligand(PDB-6Y2F) GLU-166 (1.92,2.15), HIE-163 (1.89), GLY-143 (2.06), CYS-145(2.06), PHE-140 (2.30), H20 (2.21) THR-26 (2.37) −7.720