TABLE 1.
Genes in the 14 Dipelta chloroplast genomes.
Gene group | Gene name |
Ribosomal RNA genes | rrn4.5c, rrn5c, rrn16c, rrn23c |
Transfer RNA genes | trnA-UGCac, trnC-GCA, trnD-GUC, trnE-UUC, trnF-GAA, trnG-UCC, trnH-GUG, trnI-CAUc, trnI-GAUac, trnK-UUUa, trnL-CAAc, trnL-UAG, trnL-UAAa, trnM-CAU, trnfM-CAU, trnN-GUUc, trnP-UGG, trnQ-UUG, trnR-UCU, trnR-ACGc, trnS-UGA, trnS-GGA, trnS-GCU, trnT-GGU, trnT-UGU, trnV-GACc, trnV-UACa, trnW-CCA, trnY-GUA |
Small subunit of ribosome | rps2, rps3, rps4, rps7c, rps8, rps11, rps12bc, rps14, rps15, rps16a, rps18b, rps19 |
Large subunit of ribosome | rpl2a, rp114, rp116, rp120, rp122, rp123, rp132, rp133, rp136 |
DNA-dependent RNA polymerase | rpoA, rpoB, rpoC1a, rpoC2 |
Translational initiation factor | infA |
Subunits of photosystem I | psaA, psaB, psaC, psaI, psaJ, ycf3b, ycf4 |
Subunits of photosystem II | psbA, psbB, psbC, psbD, psbE, psbF, psbH, psbI, psbJ, psbK, psbL, psbM, psbN, psbT |
NADH oxidoreductase | ndhAa, ndhBac, ndhC, ndhD, ndhE, ndhF, ndhG, ndhH, ndhI, ndhJ, ndhK |
Subunits of cytochrome | petA, petB, petD, petG, petL, petN |
Subunits of ATP synthase | atpA, atpB, atpE, atpFa, atpH, atpI |
Large subunit of Rubisco | rbcL |
Maturase | matK |
Envelope membrane protein | cemA |
Subunit of acetyl-CoA | accD |
C-type cytochrome synthesis gene | ccsA |
Protease | clpP |
Conserved open reading frames | ycf1, ycf2ac |
aGene with one intron.bGene with two introns.cGenes located in the inverted repeats.