Table 4.
Cooccurrence or mutual exclusive alterations of 7 hub genes in LUAD ranked by p value.
| Gene A | Gene B | p value | Log odds ratio | Association |
|---|---|---|---|---|
| CDH5 | PECAM1 | <0.001 | >3 | Tendency towards cooccurrence |
| CDH5 | VWF | <0.001 | >3 | Tendency towards cooccurrence |
| VWF | PECAM1 | 0.007 | >3 | Tendency towards cooccurrence |
| MMP9 | SPP1 | 0.097 | 2.315 | Tendency towards cooccurrence |
The correlation analysis of 7 hub genes showed that the relationships of gene pairs that were statistically significant (p < 0.05) all had a tendency towards cooccurrence. Log odds ratio > 0: association towards cooccurrence. Log odds ratio ≤ 0: association towards mutual exclusivity. p value < 0.05: significant association. p value: derived from Fisher Exact Test. Log odds ratio: quantifies how strongly the presence or absence of alterations in gene A is associated with the presence or absence of alterations in gene B in the selected tumors.