Table 5.
Frequency of studied SOD1 variants based on their structural and functional annotation parameters by various bioinformatics tools
| Parameter | Component(s) | Frequency |
|---|---|---|
| Domain location | Variable | 8 |
| Average | 11 | |
| Conserve | 49 | |
| PROVEAN phenotype | Deleterious | 62 |
| Neutral | 6 | |
| SIFT phenotype | Affect protein | 52 |
| Tolerant | 16 | |
| DDG iMutant stability | Decrease | 63 |
| Increase | 5 | |
| EcoDDG stability | Destabilize | 60 |
| Stabilize | 8 | |
| Eco entropy dynamut Flexibility | Decrease | 38 |
| Increase | 30 | |
| HumDiv phenotype | Benign | 7 |
| Possibly damaging | 8 | |
| Probably damaging | 53 | |
| RegulomeDB | 2b + 3a | 11 |
| 4 | 46 | |
| 5 | 9 |