. 2020 Aug 11;37(10):2525–2533. doi: 10.1007/s10815-020-01921-4

Table 2.

Data production in the whole–genome data based on the family

Family no.	Sample	Raw data		Clean data			Mapped ratio, %	Coverage ratio, %	Depth of average sequencing, ×	Depth of targeted region, ×	ADO, %
Family no.	Sample	Reads, M	Bases, G	Reads, M	Bases, G	Ratio, %	Mapped ratio, %	Coverage ratio, %	Depth of average sequencing, ×	Depth of targeted region, ×	ADO, %
Family 1	Husband	268	53.6	258	51.7	96.47	91.17	90.49	15.64	14.9	NA^a
	Wife	383	76.5	368	73.7	96.25	91.49	93.68	22.48	22.03	NA
	E01-PB1	401	80.1	358	71.5	89.41	91.56	93.02	26.65	31.05	11.54 (15/130)
	E01-PB2	387	77.3	356	71.1	91.98	91.73	88.47	25.88	33.26	NA
	E01	450	89.9	421	84.3	93.68	90.10	96.77	30.37	35.7	6.92 (9/130)
	E02-PB1	427	85.5	392	78.5	91.78	91.31	94.12	28.82	33.52	10.77 (14/130)
	E02-PB2	407	81.4	376	75.1	92.31	90.87	87.93	27.38	35.37	NA
	E02	432	86.4	408	81.6	94.43	91.53	96.62	29.17	34.63	8.46 (11/130)
Family 2	Husband	341	68.2	328	65.6	96.15	92.19	96.20	20.12	19.24	NA
	Wife	322	64.3	310	62.1	96.51	91.56	94.92	18	16.95	NA
	1^b-E01	421	84.2	397	79.4	94.24	90.92	96.40	28.33	32.81	5.63 (13/231)
	1-E02	449	89.8	427	85.5	95.17	91.31	95.95	30.13	33.97	7.36 (17/231)
	1-E03	434	86.8	414	82.8	95.37	91.72	96.52	29.23	32.65	5.19 (12/231)
	1-E04	418	83.5	394	78.9	94.43	90.87	96.43	28.12	32.03	4.76 (11/231)
	2^c-E01	263	52.7	251	50.2	95.32	90.73	95.25	8.04	13.7	9.09 (21/231)
	2-E02	287	57.4	276	55.2	96.10	90.94	94.09	8.71	12.96	8.66 (20/231)
	2-E03	228	45.6	219	43.8	96.16	90.60	89.65	7.18	13.28	9.52 (22/231)
	2-E04	284	56.8	272	54.4	95.84	90.35	94.95	9.13	12.51	7.36 (17/231)
	2-E05	80	16	76	15.2	94.91	89.34	76.99	2.48	7.02	17.75 (41/231)
	2-E06	325	65.1	313	62.6	96.17	90.87	95.88	10.3	14.36	8.23 (19/231)
	2-E07	390	78.1	373	74.7	95.66	91.18	96.33	12.26	15.81	7.79 (18/231)

Note: ^aNA, data not available; ^b1-, in the first PGT cycle; ^c2-, in the second PGT cycle