Figure 2.

Phylogenomic relationships between P. lobata (yellow circles), P. compressa (blue triangles = unbleached, empty triangles = bleached), and outgroup species (P. evermanni = brown circles). (A) coral mitochondrial genome RAxML tree consisting of ~ 18 k bp; (B) coral mitochondrial genome haplotype network; (C) RAxML tree of approximately 3 million SNPs from reads mapped to the P. lutea coral reference genome. mt: mitochondrial. P.sp1 and P.sp2 represent Porites corals with atypical colony morphology, P.sp1 was described by Brown et al. 2020 as an unusually resilient brooding coral³⁷. Red * indicates Maximum Likelihood support value > 95%.