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. 2020 Sep 3;12(9):2689. doi: 10.3390/nu12092689

Table 1.

Lactase persistence (LP)-associated genetic variants in the MCM6.

SNP RS-id Additional Information
−14010:G>C ** rs145946881 Widely studied and associated
−14009:T>G ** rs869051967 Widely studied and associated
−13915:T>G ** rs41380347 Widely studied and associated
−13910:C>T ** rs4988235 Widely studied and associated
−13907:C>G ** rs41525747 Widely studied and associated
−22.018:G>A rs182549 In complete LD with the causal −14010:G>C
−14011:C>T * rs4988233
−13906:T>A
−13779:G>C * rs527991977
−13744:C>G
−13730:T>G rs4954492
−13603:C>T rs56348046
−13495:C>T rs4954490
−13914:G>A Rare variant (q < 5%)
−14062:G>A Rare variant (q < 5%)
−14028:T>C rs759157971 Rare variant (q < 5%)
−13753:C>T Rare variant (q < 5%)
−13693:G>A Rare variant (q < 5%)
−13806:A>G ss820496565 Rare variant (q < 5%)
−13964:C>A Rare variant (q < 5%)
−13771:A>G Rare variant (q < 5%)
−14010 G>A rs145946881 Rare variant (q < 5%)
−13926 A>C Rare variant (q < 5%)

For all included genetic variants, we report any available identifier as well as any evidence of functional control on LCT expression according to the literature. Evidence of functional role in controlling LCT expression is indicated as follows: ** for validated functional SNPs, * some evidence for functional SNPs. Abbreviations: LD, Linkage Disequilibrium; RS-id, Reference SNP identifier; SNP, Single Nucleotide Polymorphism.