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. 2020 Aug 20;12(9):913. doi: 10.3390/v12090913

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© 2020 by the authors.

Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).

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The Maximum Clade Credibility (MCC) phylogenetic tree of DENV-4 Genotype II generated by BEAST Bayesian inference method with TrN + G evolution model calculated using E gene sequences. The red labels indicate isolates from Jember, while blue labels indicate strains from other cities in Indonesia and green labels indicate strains from nearby Surabaya city. The number in the node indicates the posterior probability of that particular cluster, with values higher than 0.5 shown. Arabic numbers depict further grouping into DENV lineages. Time to the most recent common ancestor (tmrca) is indicated as median year (95% Highest Posterior Density (HPD)).