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. 2020 Sep 4;12(9):981. doi: 10.3390/v12090981

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© 2020 by the authors.

Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).

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HTLV-1 tax sequence recognized by LAMP primers. HTLV-1 genome sequence corresponding to LAMP primers designed based on the ATK strain (GenBank J02029, which belongs in Table 1; aB), were aligned with representative sequences from other HTLV-1 genotypes: 1aA_LA, Cosmopolitan Transcontinental, Latin American cluster; 1aA_ME, Cosmopolitan Transcontinental, Middle East cluster; 1aD, North Africa; 1b, Africa; and 1c, Melanesia. The nucleotide positions are related to the ATK strain (indicated by arrows) and the regions for primer hybridization are highlighted in boxes: green: F3/B3; blue: F2/B2; yellow: LF/LB; gray: F1c/B1c.