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. 2020 Sep 4;12(9):981. doi: 10.3390/v12090981

Table 1.

Loop-Mediated Isothermal Amplification (LAMP) primers for human-T lymphotropic viruses HTLV-1 and HTLV-2.

Target Primers 1 Sequence (5′→3′) 2 Positions 2,3
HTLV-1 FIP-1 5′-tgccaggctgttagcgtgacgaagactgtttgcccacca-3′ (F1c: 8012–7993)
(F2: 79487966)
BIP-1 5′-aacggcctccttccgttccacgtgccatcggtaaatgtcc-3′ (B1c: 8014–8033)
(B2: 8082–8063)
F3-1 5′-caggggccctaataattctacc-3′ 7925–7946
B3-1 5′-agggcccggaaatcatagg-3′ 8101–8083
LF-1 5′-cctagcaggctggaaaaggg-3′ 7986–7967
LB-1 5′-ctcaaccctcaccactcca-3′ 8034–8052
HTLV-2 FIP-2 5′-gatacagggagccctcacgcacacaggggcagtcatag-3′ (F1c: 7887–7869)
(F2: 7810–7828)
BIP-2 5′-gcctggtgtacaggacttctcccgtcattgaaggtccat-3′ (B1c: 7894–7914)
(B2: 7967–7950)
F3-2 5′-tcaccaaggtgcctctaa-3′ 7757–7774
B3-2 5′-gcaagggccggaaatcat-3′ 7992–7975
LF-2 5′-ggttggaacattgtggtgg-3′ 7868–7850
LB-2 5′-tccatcttaacaaccccagg-3′ 7924–7943

1 Forward inner primers (FIP) and backward inner primers (BIP) are assembled sequences of F1c + F2 and B1c + B2, respectively. 2 F1c/B1c regions are in bold, and F2/B2 sequences are underlined. 3 Nucleotide positions according to HTLV-1 ATK (J02029) and HTLV-2 Mo (M10060) strains.