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Root mean square deviation (RMSD) analysis of molecular dynamic (MD) simulation trajectory. The RMSD plot obtained for (A) C-α atoms of the protein SARS-CoV-2 Mpro (PDB ID 6LU7) with CM02, CM06 and CM07 complex; and (B) ligand-heavy atoms for CM02, CM06 and CM07-SARS-CoV-2 Mpro complex (PDB ID: 6LU7), with respect to the reference frame at time 0 ns.
