Table 2.
Age (wks a) | Fecal Swabs | Oropharyngeal Swabs | Oral Fluids | |||
---|---|---|---|---|---|---|
% | Mean Cq c | % | Mean Cq | % | Mean Cq | |
(N b) | (Range) | (N) | (Range) | (N) | (Range) | |
3 | 95% | 31.06 | 31% | 37.66 | NA d | NA d |
(61 of 64) | (16.78–38.88) | (20 of 64) | (32.34–39.27) | |||
5 | 17% | 35.68 | 2% | 36.22 | 88% | 32.92 |
(11 of 64) | (27.07–39.59) | (1 of 64) | - | (7 of 8) | (28.31–36.23) | |
7 | 47% | 33.63 | 5% | 37.77 | 100% | 31.95 |
(28 of 60) | (24.07–39.55) | (3 of 60) | (36.90–38.55) | (8 of 8) | (28.63–34.49) | |
9 | 28% | 34.85 | 2% | 36.57 | 100% | 31.73 |
(15 of 53) | (26.50–38.77) | (1 of 53) | - | (8 of 8) | (27.18–34.25) | |
11 | 88% | 34.29 | 24% | 37.01 | 100% | 32.20 |
(44 of 50) | (27.38–38.54) | (12 of 50) | (34.43–39.94) | (8 of 8) | (30.52–32.50) | |
16 | 20% | 36.37 | 2% | 36.54 | 75% | 36.14 |
(10 of 49) | (30.33–39.57) | (1 of 49) | - | (6 of 8) | (33.36–38.50) | |
21 | 4% | 37.37 | 0% | 0 | 75% | 35.73 |
(2 of 47) | (36.29–38.45) | (0 of 47) | - | (6 of 8) | (33.13–38.28) | |
25 | 41% | 34.57 | 4% | 37.70 | 100% | 34.23 |
(19 of 46) | (30.27–37.85) | (2 of 46) | (37.57–37.84) | (8 of 8) | (33.22–35.48) |
a wks, Age in weeks of pigs sampled. b N, Number of samples tested by RT-qPCR. c Cq, Quantification cycle. d NA, Not available.