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. 2020 Oct 13;51:128. doi: 10.1186/s13567-020-00850-5

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© The Author(s) 2020

Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.

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GSEA results and gene modulations related to KEGG pathways at 3 dpi. A An enrichment map (node: pathway, edge: similarity coefficient between gene sets) was built based on significant pathways (FDR < 0.05), and a heatmap was generated using the core enriched genes in the pathway with the highest NES (influenza A). B Genes overlapping with the GCN are shown in bold. Expression changes at 3 dpi in the influenza A pathway are presented as log₂ FC values for each tissue.

Data information: Proteins corresponding to the DEGs involved in the GCN are indicated with a black border.