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. Author manuscript; available in PMC: 2021 Feb 17.
Published in final edited form as: Nat Struct Mol Biol. 2020 Aug 17;27(10):901–912. doi: 10.1038/s41594-020-0475-8

Extended Data Figure 4. Enrichment of 5mers in HiTS-CLIP.

Extended Data Figure 4.

5mer enrichment of top 200 5mers in two HiTS-CLIP datasets in both introns and 3' UTRs. 5mer enrichment was calculated by determining the frequencies of all 1,024 5mers in CLIP peaks in each region and dataset and subsequently normalizing to control peaks from that region. Peaks from (a) Mouse ventral spinal neuron 3' UTR HiTS-CLIP, (b) Mouse whole brain intronic HiTS-CLIP, and (c) Mouse whole brain 3' UTR HiTS-CLIP were analyzed. Gold indicates primary motifs, teal indicates secondary motifs.