Table 3.
DEGs in the JA, SA, and ETH biosynthesis pathways in the SlDREBA4-overexpressed and silenced plants.
| Gene ID | Readcount (OE/EV) | Readcount [VIGS/(V1+V2)] | log2FoldChange [(OE/EV)/(VIGS/V1+V2)] | Definition | Hormone biosynthetic pathway |
|---|---|---|---|---|---|
| Solyc01g009680 | 259.96/121.66 | 209.90/458.45 | 1.10/−1.12 | Lipoxygenase | JA |
| Solyc08g029000 | 199.00/130.26 | — | 0.60 | Lipoxygenase | JA |
| Solyc04g039930 | 8.18/1.67 | — | 2.32 | 12-oxophytodienoate reductase-like protein | JA |
| Solyc01g007920 | 383.01/252.28 | 223.35/332.24 | 0.60/−0.57 | Isochorismatase | SA |
| Solyc03g042560 | 157.66/74.40 | 73.37/108.51 | 1.08/−0.56 | Phenylalanine ammonia-lyase | SA |
| Solyc05g026500 | 192.30/133.32 | 9.40/117.59 | 0.52/−3.64 | Phenylalanine ammonia-lyase | SA |
| Solyc03g036470 | 151.84/103.25 | — | 0.55 | Phenylalanine ammonia-lyase | SA |
| Solyc03g007070 | 1039.70/546.89 | 86.91/231.66 | 0.93/−1.41 | 1-aminocyclopropane-1-carboxylate synthase | ETH |
| Solyc08g079750 | 4118.98/3204.55 | 713.15/1285.27 | 0.36/−0.85 | 1-aminocyclopropane-1-carboxylate synthase | ETH |
OE, SlDREBA4-overexpressed plants; EV, empty vector-transformed plants; VIGS: SlDREBA4-silenced plants; V1+V2, plants co-transformed by empty vectors pTRV1 and pTRV2; “—”, not detected.