CAA	Chloroacetamide extracellular matrix
CIMP	Pathway characterised by the CpG island methylation phenotype
CIN	Chromosomal instability pathway
CRC	Colorectal cancer
CTCs	Circulating tumor cells
ctDNA	Circulating tumor DNA
ECM	Extracellular matrix
ESCRT	Endosomal sorting complex required for transport
EVs	Extracellular vesicles
FBS	Fetal bovine serum
FDR	False discovery rate
FISH	Fluorescence in situ hybridization
GO	GeneOntology,
IHC	Immunohistochemistry
ILVs	Intraluminal vesicles
KEGG	Kyoto Encyclopedia of Genes and Genomes
LC	Lung cancer
LC–MS/MS	Liquid chromatography-tandem mass spectrometry
LDCT	Low-dose computed tomography
LFQ	Label free quantification
miRNA	Micro RNA
MSI	Microsatellite instability
MVEs	Multivesicular endosomes
NSCLC	Non-small cell lung carcinoma
SIS	Stable isotope-labeled peptides standards
SRM	Selected reaction monitoring
TCEP	Tris(2 carboxyethyl)phosphine
TEAB	Triethylammonium bicarbonate buffer
WhL	Whole cell lysate