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. Author manuscript; available in PMC: 2020 Oct 14.
Published in final edited form as: Chembiochem. 2009 Nov 23;10(17):2753–2759. doi: 10.1002/cbic.200900494

Table 1.

HSP90 affinity (EC50m] with statistical analysis (r2)) and pharmacodynamic (PD) evaluation of pochoximes (measurement of Her-2 depletion in SkBr3 cells treated with the inhibitor overnight (EC50, [μm]). See the Supporting Information for a table with structures.

Entry Compound Affinity [μm] r2 PD [μm]
1 A1 B1 C1 D1 0.034 0.996 ≤5.0
2 D18 0.540 0.994
3 C2 D1 0.588 0.991 > 10
4 C4 D2 0.886 0.997
5 D3 0.060 0.991 ≤ 0.1
6 D4 0.070 0.983 ≤ 0.5
7 D5 0.243 0.994 < 1.0
8 D6 0.238 0.990 < 5.0
9 D7 2.240 0.990 > 10
10 D8 5.757 0.995 > 10
11 D9 0.022[a] 0.988 ≤ 0.5
12 D10 0.124 0.995 ≤ 0.5
13 D11 0.070 0.998 ≤ 0.5
14 D12 0.640 0.997 ≤ 5.0
15 D13 > 10 0.991
16 D14 0.337 0.995 ≤ 5.0
17 D15 0.128 0.997 ≤ 1.0
18 D16 0.119 0.982 ≤ 1.0
19 D17 0.219 0.998 ≤ 0.5
20 D18 0.196 0.991 ≤ 1.0
21 D19 0.094 0.982 ≤ 5.0
22 D20 0.162 0.993 ≤ 1.0
23 D21 2.992 0.993 > 10
24 D22 0.057 0.984 ≤ 1.0
25 D23 0.140 0.991
26 D24 0.155 0.987 ≤ 5.0
27 D25 0.116 0.980 ≤ 1.0
28 D26 0.372 0.994 ≤ 10
29 B2 C2 D1 1.936 0.997 > 10
30 C6 3.027 0.989 > 10
31 B3 C1 D18 0.200 0.989 ≤ 1.0
32 C2 D1 0.196 0.994 ≤ 1.0
33 D18 4.663 0.993 > 10
34 C4 D1 0.046 0.976 ≤ 0.5
35 B4 C1 0.032 0.910
36 C2 D1 0.811 0.988
37 C4 0.021[a] 0.988 ≤ 0.5
38 C5 0.587 0.987 ≤ 5.0
39 B5 C1 D1 0.020[a] 0.965
40 A2 B1 C1 0.039 0.996
41 C2 0.096 0.994 ≤ 5.0
42 C3 0.198 0.980 ≤ 1.0
43 C5 D1 0.182 0.984 ≤ 5.0
44 C7 0.079 0.931
45 C8 0.432 0.985 ≤ 1.0
46 B2 C2 D1 0.543 0.981 ≤ 5.0
47 C4 0.510 0.986 ≤ 10
48 B3 C2 D18 0.900 0.976 > 10
49 B4 C1 D1 0.154 0.995 ≤ 1.0
50 C2 1.751 0.998 ≤ 10
51 C4 0.170 0.976 ≤ 5.0
52 C5 1.722 0.996 > 10
53 C6 0.599 0.995 > 10
54 B5 C1 0.010[a] 0.980
55 C4 0.018[a] 0.980
56 radicicol 0.156 0.997
57 17-AAG 0.033 0.978
[a]

Based on the fact that the assay is performed by using 20 nm of HSP90, an IC50 below 20 nm can not be reliably measured.