Table 1.
List of taxa used in the current phylogenetic study and GenBank acc. nos of DNA sequences. Strains and corresponding sequences that were newly obtained are printed in bold.
| Species | Code | GenBank Accession Numbers | References | |||
|---|---|---|---|---|---|---|
| LSU | ITS | RPB2 | TUB2 | |||
| Achaetomium macrosporum | CBS 532.94 | KX976699 | KX976574 | KX976797 | KX976915 | [38] |
| Amphisphaeria acericola | MFLU 16-2479 | MK640424 | MK640423 | - | - | [8] |
| Amphisphaeria acericola | MFLUCC 14-0842 * | MF614131 | MF614128 | - | - | [8] |
| Amphisphaeria camelliae | HKAS 107021 *,a | MT756615 | MT756621 | MT789850 | MT774368 | This study |
| Amphisphaeria camelliae | MFLUCC 20-0122 b | MT756616 | MT756622 | MT789851 | MT774369 | This study |
| Amphisphaeria curvaticonidia | HKAS 102288 a | MT756618 | MT756624 | MT789853 | - | This study |
| Amphisphaeria curvaticonidia | MFLUCC 18-0620 *,b | MT756617 | MT756623 | MT789852 | - | This study |
| Amphisphaeria flava | MFLUCC 18-0361 * | MH971234 | MH971224 | - | MK033638 | [7] |
| Amphisphaeria fuckelii | WU 33555 | KT949903 | KT949903 | - | - | [16] |
| Amphisphaeria fuckelii | CBS 140409 * | KT949902 | KT949902 | MH554918 | MH554677 | [16,39] |
| Amphisphaeria mangrovei | NFCCI-4247 * | MG844275 | MG844283 | - | - | [6] |
| Amphisphaeria micheliae | HKAS 107012 *,a | MT756619 | MT756625 | MT789854 | MT774370 | This study |
| Amphisphaeria micheliae | MFLUCC 20-0121b | MT756620 | MT756626 | MT789855 | MT774371 | This study |
| Amphisphaeria neoaquatica | MFLUCC 14-0045 * | MK835805 | MK828607 | - | - | [17] |
| Amphisphaeria qujingensis | KUMCC 19-0186 | MN707567 | MN707568 | - | - | [9] |
| Amphisphaeria qujingensis | KUMCC 19-0187 * | MN556316 | MN477033 | - | - | [9] |
| Amphisphaeria sambuci | CBS 131707 * | KT949904 | KT949904 | MH554911 | MH704632 | [16,39] |
| Amphisphaeria sambuci | WU 33557 | KT949905 | KT949905 | - | - | [16] |
| Amphisphaeria sambuci | WU 33558 | KT949906 | KT949906 | - | - | [16] |
| Amphisphaeria sorbi | MFLUCC 13-0721 * | KP744475 | KR092797 | - | - | [5] |
| Amphisphaeria thailandica | MFLU 18-0794 * | MH971235 | MH971225 | MK033640 | MK033639 | [7] |
| Amphisphaeria umbrina | AFTOL-ID 1229 | FJ176863 | FJ176809 | - | - | [40] |
| Amphisphaeria uniseptata | CBS 114967 * | MH554197 | - | MH554878 | MH554638 | [39] |
| Amphisphaeria yunnanensis | KUMCC 19-0188 * | MN556306 | MN477177 | - | - | [9] |
| Amphisphaeria yunnanensis | KUMCC 19-0189 | MN550992 | MN550997 | - | - | [9] |
| Anungitea eucalyptorum | CBS 137967 | KJ869176 | KJ869118 | - | - | [41] |
| Anungitea grevilleae | CBS 141282 | KX228304 | KX228252 | - | - | [42] |
| Bagadiella lunata | CBS 124762 * | GQ303300 | GQ303269 | - | - | [43] |
| Bartalinia pini | CBS 143891 * | MH554330 | MH554125 | MH555033 | MH554797 | [39] |
| Bartalinia pondoensis | CBS 125525 * | MH875078 | MH863602 | MH554904 | MH554663 | [39,40] |
| Beltrania pseudorhombica | CBS 138003 * | KJ869215 | KJ869158 | MH555032 | - | [39,41] |
| Beltrania rhombica | CBS 123.58 | MH869260 | MH857718 | MH554899 | MH704631 | [39,44] |
| Beltraniella endiandrae | CBS 137976 * | KJ869185 | KJ869128 | - | - | [41] |
| Beltraniopsis neolitseae | CBS 137974 * | KJ869183 | KJ869126 | - | - | [41] |
| Castanediella acaciae | CBS 139896 * | KR476763 | KR476728 | - | - | [45] |
| Castanediella brevis | KUMCC 18-0132 * | MH806358 | MH806361 | - | - | [46] |
| Castanediella eucalypti | CBS 139897 * | KR476758 | KR476723 | - | - | [45] |
| Castanediella eucalypticola | CBS 141317 * | KX228317 | KX228266 | - | KX228382 | [42] |
| Chaetomium elatum | CBS 374.66 | MH870466 | KC109758 | KF001820 | KC109776 | [38,44] |
| Clypeophysalospora latitans | CBS 141463 * | KX820261 | KX820250 | - | - | [47] |
| Cylindrium corymbiae | CBS 146087 * | MT223887 | MT223792 | MT223679 | MT223732 | [48] |
| Cylindrium grande | CPC 35403 * | MK876425 | MK876384 | MK876481 | MK876502 | [49] |
| Heterotruncatella acacigena | CBS 143880 * | MH554295 | MH554084 | MH554996 | MH554756 | [39] |
| Heterotruncatella vinaceobubalina | CBS 143897 | MH554341 | MH554139 | MH555045 | MH554812 | [39] |
| Hymenopleella hippophaeicola | CBS 140410 * | KT949901 | KT949901 | MH554919 | MH554678 | [16,39] |
| Hymenopleella polyseptata | CBS 143887 * | MH554321 | MH554116 | MH555024 | MH554789 | [39] |
| Hymenopleella schefflerae | COAD 2371 * | MH084761 | MH128360 | - | MH231215 | [20] |
| Hymenopleella austroafricana | CBS 143886 * | MH554320 | MH554115 | MH555023 | MH554788 | [39] |
| Neophysalospora eucalypti | CBS 138864 * | KP004490 | KP004462 | - | - | [50] |
| Phlogicylindrium uniforme | CBS 131312 * | JQ044445 | JQ044426 | MH554910 | MH704634 | [39,51] |
| Phlogicylindrium eucalyptorum | CBS 111680 | KF251707 | KF251204 | KF252209 | KF252698 | [52] |
| Plectosphaera eucalypti | CBS 120063 * | DQ923538 | DQ923538 | - | - | [53] |
| Robillarda roystoneae | CBS 115445 * | MH874545 | KR873254 | MH554880 | KR873317 | [39,44,54] |
| Seimatosporium rosae | MFLUCC 14-0621 * | MH823070 | LT853105 | LT853153 | LT853253 | [3,55] |
| Seiridium marginatum | CBS 140403 * | MH878679 | KT949914 | LT853149 | LT853249 | [16,44,55] |
| Sordaria fimicola | CBS 723.96 | MH874231 | - | DQ368647 | - | [44,56] |
Types and authentic strains are indicated with (*). Codes with a and b are denoted holotypes and ex-type cultures, respectively. Missing sequences are indicated by (-). Newly generated sequences are in bold. Abbreviations: AFTOL-ID—Assembling the Fungal Tree of Life; CBS—Centraalbureau voor Schimmelcultures, Utrecht, The Netherlands; COAD—Culture Collection of the Universidade Federal de Viçosa, Brazil; CPC—Culture collection of Pedro Crous, housed at CBS; HKAS—The Herbarium of Cryptogams Kunming Institute of Botany Academia Sinica, Kunming, China; KUMCC—Kunming Institute of Botany Culture Collection, Kunming, China; MFLU—Mae Fah Luang University Herbarium, Chiang Rai, Thailand; MFLUCC—Mae Fah Luang University Culture Collection, Chiang Rai, Thailand; NFCCI—National Fungal Culture Collection of India, Agharkar Research Institute, India. WU—Herbarium of the Institute of Botany, University of Vienna, Austria.