Table 1.

Primers used for amplification and sequencing of the Escherichia coli genes involved in fosfomycin or nitrofurantoin resistance.

Gene	Forward Primer	Reverse Primer	Amplicon Size (bp)	Reference
murA	5′-AAACAGCAGACGGTCTATGG-3′	5′-CCATGAGTTTATCGACAGAACG-3′	1542	[9]
glpT	5′-GCGAGTCGCGAGTTTTCATTG-3′	5′-GGCAAATATCCACTGGCACC-3′	1785
uhpT	5′-TTTTTGAACGCCCAGACACC-3′	5′-AGTCAGGGGCTATTTGATGG-3′	1667
uhpA	5′-GATCGCGGTGTTTTTTCAG-3′	5′-GATACTCCACAGGCAAAACC-3′	771
ptsI	5′-GAAAGCGGTTGAACATCTGG-3′	5′-TCCTTCTTGTCGTCGGAAAC-3′	1908
cyaA1	5′-AACCAGGCGCGAAAAGTGG-3′	5′-TGATGGCTGATGATCGACTC-3′	1559	[9] This study
cyaA2	5′-AAAGCTCAGCCGTGAACGC-3′	5′-ACCTTCTGGGATTTGCTGG-3′	1648
nfsA	5′-ATTTTCTCGGCCAGAAGTGC-3′	5′-AGAATTTCAACCAGGTGACC-3′	1036	[5]
nfsB	5′-CTTCGCGATCTGATCAACG-3′	5′-CAACAGCAGCCTATGATGAC-3′	923
ribE	5′-AAGGGAAGCAGCGCACGAA-3′	5′-GGACAACTGCCAGGAGTAGA-3′	634	This study
fosA3	5′-GCGTCAAGCCTGGCATTT-3′	5′-GCCGTCAGGGTCGAGAAA-3′	282	[10]
fosA4	5′-CTGGCGTTTTATCAGCGGTT-3′	5′-CTTCGCTGCGGTTGTCTTT-3′	230	[11]
fosA5	5′-TATTAGCGAAGCCGATTTTGCT-3′	5′-CCCCTTATACGGCTGCTCG-3′	177
fosA6	5′-GCTACGGTTCAGCTTCCAGA-3′	5′-CGAGCGTGGCGTTTTATCAG-3′	242	This study
fosC2	5′-CGTTCCGTGGAGTTCTATAC-3′	5′-CTTGATAGGGTTTAGACTTC-3′	334	[8]
oqxA	5′-GACAGCGTCGCACAGAATG-3′	5′-GGAGACGAGGTTGGTATGGA-3′	339	[12]
oqxB	5′-CGAAGAAAGACCTCCCTACCC-3′	5′-CGCCGCCAATGAGATACA-3′	240