Table 2.
Sample name | Total reads | Clean reads | GC (%) | Mapped reads (reference genome) | Mapped reads (Rfam database) |
---|---|---|---|---|---|
N1 | 133,679,270 | 43,525,148 (33%) | 47 | 5,901,044 (97%) | 10,099,878 (88%) |
N2 | 156,613,612 | 44,614,556 (28%) | 48 | 8,544,838 (97%) | 11,520,278 (88%) |
N3 | 30,570,028 | 25,687,700 (84%) | 48 | 8,134,694 (97%) | 10,916,943 (91%) |
T1 | 48,668,926 | 39,956,661 (82%) | 48 | 7,474,852 (98%) | 10,713,059 (85%) |
T2 | 44,924,294 | 37,162,849 (83%) | 48 | 9,330,200 (97%) | 12,687,170 (92%) |
T3 | 25,934,552 | 19,599,274 (76%) | 49 | 10,416,571 (97%) | 12,936,944 (91%) |