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. 2020 Aug 20;39(20):e103667. doi: 10.15252/embj.2019103667

Figure 4. Expression analysis of TEs.

Figure 4

  1. Box plot summarizing differential expression of unambiguously mapped individual TEs, compared with all protein‐coding genes, or housekeeping genes. Box plots outline the interquartile range (IQR) with the median and whiskers ± 1.5 IQR. For all P‐values, see also Table EV6. **indicates a P‐value smaller than 1.01e−11 (two‐sided non‐paired Wilcoxon rank sum test).
  2. Heatmap of expression differences for all 318 Arabidopsis TE families in stem cells relative to non‐stem cells.
  3. Number of TE families with at least 2× expression difference. E = nuclei from embryos, D7/14/35 = nuclei from 7/14/35‐day-old plants.