Table 1. Comparisons of MoE and nsp mutations.
| NSP | Mutations | Values | MoE absent | MoE present | Total | p | |||
|---|---|---|---|---|---|---|---|---|---|
| n | % | n | % | n | % | ||||
| nsp7 | 11916C>T S3884L |
Absent | 26,326 | 98.4 | 2,833 | 99.7 | 29,159 | 98.5 | <0.001* |
| Present | 433 | 1.6 | 8 | 0.3 | 441 | 1.5 | |||
| 12076C>T N3937N |
Absent | 26,735 | 99.9 | 2,837 | 99.9 | 29,572 | 99.9 | 0.339 | |
| Present | 24 | 0.1 | 4 | 0.1 | 28 | 0.1 | |||
| 11919C>T S3885F |
Absent | 26,738 | 99.9 | 2,840 | 100.0 | 29,578 | 99.9 | 0.717 | |
| Present | 21 | 0.1 | 1 | – | 22 | 0.1 | |||
| 12073C>T D3936D |
Absent | 26,750 | 100.0 | 2,834 | 99.8 | 29,584 | 99.9 | <0.001* | |
| Present | 9 | – | 7 | 0.2 | 16 | 0.1 | |||
| 11962C>T L3899L |
Absent | 26,746 | 100.0 | 2,840 | 100.0 | 29,586 | 100.0 | 1.000 | |
| Present | 13 | – | 1 | – | 14 | – | |||
| nsp8 | 12478G>A M4071I |
Absent | 26,757 | 100.0 | 2,750 | 96.8 | 29,507 | 99.7 | <0.001* |
| Present | 2 | – | 91 | 3.2 | 93 | 0.3 | |||
| 12550G>A L4095L |
Absent | 26,697 | 99.8 | 2,841 | 100.0 | 29,538 | 99.8 | – | |
| Present | 62 | 0.2 | – | – | 62 | 0.2 | |||
| 12415C>T N4050N |
Absent | 26,725 | 99.9 | 2,841 | 100.0 | 29,566 | 99.9 | – | |
| Present | 34 | 0.1 | – | – | 34 | 0.1 | |||
| 12557A>G I4098V |
Absent | 26,729 | 99.9 | 2,841 | 100.0 | 29,566 | 99.9 | – | |
| Present | 30 | 0.1 | – | – | 30 | 0.1 | |||
| 12400C>T L4045L |
Absent | 26,734 | 99.9 | 2,840 | 100.0 | 29,574 | 99.9 | 0.508 | |
| Present | 25 | 0.1 | 1 | – | 26 | 0.1 | |||
| nsp12 | 14408C>T P4715L |
Absent | 7,498 | 28.0 | 702 | 24.7 | 8,200 | 27.7 | <0.001* |
| Present | 19,261 | 72.0 | 2,139 | 75.3 | 21,400 | 72.3 | |||
| 14805C>T Y4847Y |
Absent | 24,397 | 91.2 | 2,704 | 95.2 | 27,101 | 91.6 | <0.001* | |
| Present | 2,362 | 8.8 | 137 | 4.8 | 2,499 | 8.4 | |||
| 13730C>T A4489V |
Absent | 26,238 | 98.1 | 2,820 | 99.3 | 29,058 | 98.2 | <0.001* | |
| Present | 521 | 1.9 | 21 | 0.7 | 542 | 1.8 | |||
| 13536C>T Y4424Y |
Absent | 26,469 | 98.9 | 2,823 | 99.4 | 29,292 | 99.0 | 0.025* | |
| Present | 290 | 1.1 | 18 | 0.6 | 308 | 1.0 | |||
| 13862C>T T4533I |
Absent | 26,535 | 99.2 | 2,833 | 99.7 | 29,368 | 99.2 | 0.001* | |
| Present | 224 | 0.8 | 8 | 0.3 | 232 | 0.8 | |||
| nsp14 | 18060C>T L5932L |
Absent | 25,247 | 94.3 | 2,768 | 97.4 | 28,015 | 94.6 | 0.001* |
| Present | 1512 | 5.7 | 73 | 2.6 | 1585 | 5.4 | |||
| 18877C>T L6205L |
Absent | 26,185 | 97.9 | 2,522 | 88.8 | 28,707 | 97.0 | 0.001* | |
| Present | 574 | 2.1 | 319 | 11.2 | 893 | 3.0 | |||
| 18998C>T A6245V |
Absent | 26,454 | 98.9 | 2,836 | 99.8 | 29,290 | 99.0 | 0.001* | |
| Present | 305 | 1.1 | 5 | 0.2 | 310 | 1.0 | |||
| 18736T>C F6158L |
Absent | 26,751 | 100.0 | 2,613 | 92.0 | 29,364 | 99.2 | 0.001* | |
| Present | 8 | – | 228 | 8.0 | 236 | 0.8 | |||
| 19524C>T L6420L |
Absent | 26,530 | 99.1 | 2,825 | 99.4 | 29,355 | 99.2 | 0.102 | |
| Present | 229 | 0.9 | 16 | 0.6 | 245 | 0.8 | |||
| Total | 26,759 | 100.0 | 2,840 | 100.0 | 29,600 | 100.0 | |||
Note:
p-value < 0.05 was statistically significant.