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. 2020 Sep 24;18(3):e30. doi: 10.5808/GI.2020.18.3.e30

Table 1.

Probability rate of substitution (R) using maximum likelihood statistical method

Substitution rate
A T/U C G
Juke Cantor Model
 A - 8.33 8.33 8.33
 T/U 8.33 - 8.33 8.33
 C 8.33 8.33 - 8.33
 G 8.33 8.33 8.33 -
Tamura Model
 A - 9.45 6.36 7.4
 T/U 9.45 - 7.4 6.36
 C 9.45 11 - 6.36
 G 11 9.45 6.36 -
Tamura-Nei Model
 A - 9.93 6.1 8.31
 T/U 8.78 - 6.79 6.49
 C 8.78 11.06 - 6.49
 G 11.24 9.93 6.1 -
Kimura-2 Parameter Model
 A - 7.84 7.84 9.32
 T/U 7.84 - 9.32 7.84
 C 7.84 9.32 - 7.84
 G 9.32 7.84 7.84 -
Hasegawa-Kishino-Yano Model
 A - 9.95 6.11 7.74
 T/U 8.79 - 7.27 6.5
 C 8.79 11.84 - 6.5
 G 10.46 9.95 6.11 -
General Time Reversible Model
 A - 12.05 8.25 8.97
 T/U 10.64 - 6 3.64
 C 11.87 9.78 - 5.72
 G 12.13 5.57 5.38 -

Transitional substitutions are shown in bold and transversionsal substitutions are shown in italics.