Table 1.
Substitution rate | ||||
---|---|---|---|---|
A | T/U | C | G | |
Juke Cantor Model | ||||
A | - | 8.33 | 8.33 | 8.33 |
T/U | 8.33 | - | 8.33 | 8.33 |
C | 8.33 | 8.33 | - | 8.33 |
G | 8.33 | 8.33 | 8.33 | - |
Tamura Model | ||||
A | - | 9.45 | 6.36 | 7.4 |
T/U | 9.45 | - | 7.4 | 6.36 |
C | 9.45 | 11 | - | 6.36 |
G | 11 | 9.45 | 6.36 | - |
Tamura-Nei Model | ||||
A | - | 9.93 | 6.1 | 8.31 |
T/U | 8.78 | - | 6.79 | 6.49 |
C | 8.78 | 11.06 | - | 6.49 |
G | 11.24 | 9.93 | 6.1 | - |
Kimura-2 Parameter Model | ||||
A | - | 7.84 | 7.84 | 9.32 |
T/U | 7.84 | - | 9.32 | 7.84 |
C | 7.84 | 9.32 | - | 7.84 |
G | 9.32 | 7.84 | 7.84 | - |
Hasegawa-Kishino-Yano Model | ||||
A | - | 9.95 | 6.11 | 7.74 |
T/U | 8.79 | - | 7.27 | 6.5 |
C | 8.79 | 11.84 | - | 6.5 |
G | 10.46 | 9.95 | 6.11 | - |
General Time Reversible Model | ||||
A | - | 12.05 | 8.25 | 8.97 |
T/U | 10.64 | - | 6 | 3.64 |
C | 11.87 | 9.78 | - | 5.72 |
G | 12.13 | 5.57 | 5.38 | - |
Transitional substitutions are shown in bold and transversionsal substitutions are shown in italics.