Skip to main content
. 2020 Oct 15;15(10):e0240591. doi: 10.1371/journal.pone.0240591

Table 2. QTL identification for the six delayed leaf senescence traits in BC2F4 derived lines.

QTL Chr Marker interval Add LOD R2¥ Add LOD R2 Co-localized with previous studies
left Peak right
WS2016 DS2017
1 Degree of chlorophyll content of flag leaf (1DCF)
q1Dcf1.1 1 id1000027 id1001073 id1001973 3.6 4.6 0.17 0.4 2.9 0.16 -
q1Dcf1.2 1 id1021344 id1012929 3.5 4.1 0.15 - - - [12]
q1Dcf2.2 2 id2006486 id2006643 id2007213 5.5 3.7 0.13 - - - -
q1Dcf3.1 3 id3000757 id3000946 3.9 4.5 0.16 - - - [9]
q1Dcf5.1 5 id5007323 id5003638 id5013100 8.1 3.5 0.13 - - - [13]
q1Dcf6.1 6 id6015035 id6010515 id6011613 7.7 4.7 0.18 1.7 2.7 0.09 [34]
q1Dcf10.1 10 id10000391 id10001118 5.8 5.5 0.20 - - - -
q1Dcf10.2 10 id10001636 id10002779 4.9 6.5 0.23 2.6 2.5 0.12 -
q1Dcf10.3 10 id10003620 id10004477 3.8 4.7 0.15 - - - -
30 Degree of chlorophyll content of flag (30DCF)
q30Dcf1.1 1 id1000027 id1001073 id1001973 4.3 6.5 0.23 5.2 2.7 0.11 -
q30Dcf1.2 1 id1021344 id1012929 4.8 3.8 0.14 - - - [30]
q30Dcf2.2 2 id2006486 id2006643 id2007213 6.1 3.1 0.11 - - - -
q30Dcf3.1 3 id3000757 id3000946 5.8 6.7 0.23 - - - -
q30Dcf3.2 3 id3010173 id3005879 id3012786 8.8 4.2 0.15 5.2 2.9 0.16 -
q30Dcf5.1 5 id5007323 id5003638 id5013100 11.1 3.9 0.15 4.9 2.7 0.10 [33]
q30Dcf6.1 6 id6015035 id6010515 id6011613 8.4 4.4 0.16 8.2 3.2 0.18 [34]
q30Dcf7.1 7 id7002907 id7003271 id7003043 7.4 3.1 0.12 7.1 3.3 0.19 [30]
q30Dcf10.2 10 id10001636 id10002779 4.9 7.3 0.25 4.3 2.9 0.17 -
q30Dcf10.3 10 id10003620 id10004477 4.4 3.8 0.14 4.3 2.5 0.11 -
1 Degree of chlorophyll content of second leaf (1DCS)
q1Dcs1.1 1 id1000027 id1001073 id1001973 2.2 3.1 0.12 -0.5 2.7 0.15 -
q1Dcs1.2 1 id1021344 id1012929 2.9 3.0 0.12 - - - [30]
q1Dcs2.2 2 id2006486 id2006643 id2007213 6.1 3.6 0.13 - - - -
q1Dcs3.1 3 id3000757 id3000946 4.2 5.6 0.19 - - - [7]
q1Dcs3.2 3 id3010173 id3005879 id3012786 6.6 3.0 0.10 1.1 2.5 0.08 -
q1Dcs5.1 5 id5007323 id5003638 id5013100 7.8 2.8 0.11 - - - [6]
q1Dcs10.2 10 id10001636 id10002779 4.1 4.5 0.17 2.6 2.8 0.11 -
q1Dcs10.3 10 id10003620 id10004477 3.9 3.5 0.13 - - - -
30 Degree of chlorophyll content of second leaf (30DCS)
q30Dcs1.1 1 id1000027 id1001073 id1001973 2.5 4.2 0.16 7.4 3.4 0.18 -
q30Dcs1.2 1 id1021344 id1012929 4.8 3.1 0.11 5.6 2.5 0.11 [30]
q30Dcs2.2 2 id2006486 id2006643 id2007213 4.4 3.6 0.12 1.6 2.8 0.16 -
q30Dcs3.1 3 id3000757 id3000946 4.3 5.2 0.18 4.1 2.4 0.11 -
q30Dcs3.2 3 id3010173 id3005879 id3012786 6.7 2.8 0.10 - - - -
q30Dcs10.2 10 id10001636 id10002779 2.9 4.8 0.18 1.1 2.9 0.12 -
q30Dcs10.3 10 id10003620 id10004477 3.5 3.2 0.11 - - - -
Relative decline in degree of chlorophyll content of flag leaf (RDCF)
qRdcf1.1 1 id1000027 id1001073 id1001973 -3.1 3.1 0.12 0.1 2.7 0.12 -
qRdcf2.1 2 id2002229 id2001301 16.2 3.0 0.12 - - - -
qRdcf2.3 2 Id2011110 Id2005230 - - - -0.1 2.5 0.14 -
qRdcf3.1 3 id3000757 id3000946 -4.9 2.6 0.10 - - - -
qRdcf3.2 3 id3010173 id3005879 id3012786 10.0 3.7 0.13 -0.1 2.7 0.13 -
qRdcf6.1 6 id6015035 id6010515 id6011613 - - - -0.2 3.3 0.19 [34]
qRdcf7.1 7 id7002907 id7003271 id7003043 - - - -0.2 3.0 0.17 [30]
qRdcf10.2 10 id10001636 id10002779 -2.8 3.3 0.13 0.0 2.8 0.16 -
Relative decline in degree of chlorophyll content of second leaf (RDCS)
qRdcs1.1 1 id1000027 id1001073 id1001973 - - - -0.2 3.5 0.19 -
qRdcs1.2 1 id1021344 id1012929 - - - 0.15 3.7 0.20 [30]
qRdcs2.1 2 id2002229 id2001301 15.5 3.7 0.14 - - - -
qRdcs2.2 2 id2006486 id2006643 id2007213 - - - 0.0 2.8 0.16 -
qRdcs3.1 3 id3000757 id3000946 - - - -0.1 2.69 0.15 -
qRdcs10.1 10 id10000391 id10001118 3.4 2.9 0.11 - - - -
qRdcs10.2 10 id10001636 id10002779 - - - 0.03 2.5 0.118 -

Chr: chromosome,

Add: additive effect,

LOD: Logarithm of Odd value,

¥R2: Phenotypic variance (%)