Table 1.
List of IsoSearch() functions.
| Function | Parameters | Description |
| Flux_result() | input_negative, input_positive, referInput, score = 0.61 (default) | main function to generate the final result of the flux analysis |
| ref_13C_neg() | refInput, refOutput | create the reference list using negative mode unlabeled samples (12C) |
| ref_13C_pos() | refInput, refOutput | create the reference list using positive mode unlabeled samples (12C) |
| msMatch() | mzFile, refile | searching process |
| resultWrap_neg() | inputFile_neg, refInput | wrapping the flux 13C-labeling results of negative ion mode samples |
| resultWrap_pos() | inputFile_pos, refInput | wrapping the flux 13C-labeling results of positive ion mode samples |
| Sgrade() | inputResult | scoring function using Equation (1) to calculate the filtering scores |
| refLibPos_ls() | refInput | preserved function for lipidSearch |
| refLibNeg_ls() | refInput | preserved function for lipidSearch |
| refLibPos_ele() | refInput | preserved function for Elements |
| refLibNeg_ele() | refInput | preserved function for Elements |
IsoSearch program built-in functions. IsoSearch() uses the 13C-labeling peak lists and 12C-unlabeled reference list for flux search processing.