Table 1.
Masterfile of multidrug resistant (MDR) enterococci from surface water with their antimicrobial resistance (AR) gene and rep-family profiles.
| Isolate ID | Species | AR Phenotype 1 | AR Gene | Plasmid | |
|---|---|---|---|---|---|
| Rep-Family | Prototype | ||||
| 2 Ent | E. faecium | CipLinTet | tet(M), tet(O) | ||
| 2 mE | E. faecium | CipLinTet | tet(M), tet(O) | ||
| 3 mE | E. casseliflavus | CipLinSyn | 3, 11 | pAW63, pEF1071 | |
| 7 mE | E. casseliflavus | CipLinSyn | 11 | pEF1071 | |
| 23 mE | E. gallinarum | CipLinTet | tet(S) | 11 | pEF1071 |
| 24 Ent | E. faecium | CipDapTet | tet(M) | ||
| 24 mE | E. faecium | CipDapTet | tet(M) | ||
| 25 mE | E. faecium | CipEryLinTetTyl | lnu(B), tet(L), tet(M), erm(B), erm(C) | 2 | pRE25 |
| 25 Ent | E. faecium | LinStrTet | ant(6)-Ia | ||
| 26 mE | E. casseliflavus | CipLinSyn | 3, 11, 16 | pAW63, pEF1071, pSAS16 | |
| 27 Ent | E. hirae | DapLinTet | lnu(B), tet(L), tet(M) | 5, 13, 15 | pSAS, pC194, pUSA03 |
| 72 mE | E. casseliflavus | KanLinStrTetTyl | tet(M), erm(B), erm(C), aph(3′)-IIIa | 3, 11, 12 | pAW63, pEF1071, pBMB67 |
| 97 mE | E. casseliflavus | CipLinSyn | 3, 11 | pAW63, pEF1071 | |
| 101 mE | E. casseliflavus | CipLinTet | tet(M), qnrE. faecalis | 11 | pEF1071 |
| 118 mE | E. faecalis | ChlDapEryLinTetTyl | tet(M), erm(B), erm(C) | ||
| 131c- mE | E. hirae | DapLinTet | lnu(B), tet(L), tet(M) | 5 | pSAS |
| 134a- mE | E. gallinarum | EryLinTetTyl | tet(S), erm(B), erm(C) | ||
| 134c- CHR | E. gallinarum | EryLinSynTetTyl | tet(S) | ||
| 137a- Ent | E. faecalis | LinPenTet | tet(M) | 9 | pCF10 |
| 139a- Ent | E. gallinarum | CipLinTet | tet(K), tet(M) | 11, 15 | pEF1071, pUSA03 |
| 139b- Ent | E. gallinarum | CipLinTet | tet(M) | ||
| 157a- mE | E. hirae | DapLinTet | lnu(B), tet(L), tet(M) | 16 | pSAS16 |
| 160a- Ent | E. faecalis | EryLinTetTyl | tet(M), erm(B), erm(C) | ||
| 160b- mE | E. faecalis | EryLinTetTyl | tet(M), erm(B), erm(C) | 16 | pSAS16 |
| 163a- mE | E. hirae | DapLinTet | lnu(B), tet(L), tet(M), tet(O) | 5 | pSAS |
| 164 Ent | E. casseliflavus | CipLinTig | 11 | pEF1071 | |
| 168 Ent | E. casseliflavus | LinSynTig | 11 | pEF1071 | |
| 169 Ent | E. casseliflavus | CipLinTig | qnrE. faecalis | 3, 11 | pAW63, pEF1071 |
| 170 Ent | E. gallinarum | LinSynTig | |||
| 173 Ent | E. casseliflavus | CipLinTig | 3, 11 | pAW63, pEF1071 | |
| 177 Ent | E. gallinarum | LinSynTig | |||
| 182 Ent | E. casseliflavus | LinSynTig | 11 | pEF1071 | |
| 184 Ent | E. casseliflavus | CipLinTig | 3, 11 | pAW63, pEF1071 | |
| 193 Ent | E. casseliflavus | CipLinTig | 3, 11 | pAW63, pEF1071 | |
| 206 Ent | E. casseliflavus | LinSynTig | vat(E) | 11 | pEF1071 |
| 222 Ent | E. casseliflavus | CipLinTetTig | |||
| 251 Ent | E. faecalis | LinStrTet | tet(M) | 8, 9 | pAM373, pCF10 |
| 253 Ent | E. hirae | DapLinTet | lnu(B), tet(L), tet(M) | 6, 12 | pS86, pBMB67 |
| 262 Ent | E. faecium | CipLinTet | lnu(B), tet(M) | ||
| 314 Ent | E. gallinarum | CipLinTet | tet(S) | ||
| 317 Ent | E. hirae | DapLinTet | lnu(B), tet(M) | 3, 11 | pAW63, pEF1071 |
| 339 Ent | E. casseliflavus | EryLinTetTyl | tet(L), tet(M), erm(B), erm(C) | 2, 5 | pRE25, pSAS |
| 379 Ent | E. mundtii | DapLinTig | 3, 4, 11 | pAW63, pMBB1, pEF1071 | |
| 384 Ent | E. casseliflavus | CipLinSynTig | qnrE. faecalis | 11 | pEF1071 |
| 394 Ent | E. hirae | DapLinTig | lnu(B) | 6 | pS86 |
| 396 Ent | E. gallinarum | CipLinTetTig | tet(S) | 5 | pSAS |
| 407 Ent | E. faecalis | KanLinTet | tet(K), tet(L), tet(M), aph(3′)-IIIa | 6, 12 | pS86, pBMB67 |
| 420 Ent | E. hirae | CipLinSyn | |||
| 421 Ent | E. gallinarum | CipLinTetTig | tet(M) | 4 | pMBB1 |
| 423 Ent | E. faecalis | LinTetTig | tet(M) | 9, 15 | pCF10, pUSA03 |
| 436 Ent | E. faecalis | LinTetTig | tet(K), tet(M) | 15 | pUSA03 |
1 Antimicrobials: Chloramphenicol (Chl), Ciprofloxacin (Cip), Daptomycin (Dap), Erythromycin (Ery), Kanamycin (Kan), Lincomycin (Lin), Penicillin (Pen), Synercid (Q/D) (Syn), Streptomycin (Str), Tetracycline (Tet), Tigecycline (Tig), and Tylosin (Tyl).