Table 1.
Summary of the miRNA target prediction algorithms described.
| Tool | Learn Attributes Remark | Organisms | URL | Last Up-Date |
|---|---|---|---|---|
| TarPmiR | Novel features from CLASH data | Homo sapiens | http://hulab.ucf.edu/research/projects/miRNA/TarPmiR/ | 2016 |
| TargetScan | Score for mammal predictions | H. sapiens, Mus musculus, Rattus norvegicus, Pan troglodytes, Macaca mulatta, Canis familiaris, M. domestica, Bos taurus, C. elegans, Drosophila melanogaster, Danio rerio, Gallus gallus, Xenopus tropicalis | http://www.targetscan.org | 2015 |
| MiRTarget | Functional targets from RNA-seq | H. sapiens, M. musculus, R. norvegicus, C. familiaris, G. gallus | http://mirdb.org/ | 2019 |
| DIANA microT-CDS | PAR-CLIP data, targets in CDS and 3′ UTR | H. sapiens, M. musculus, C. elegans, D. melanogaster | http://diana.imis.athena-innovation.gr/DianaTools/index.php?r=microT_CDS | 2013 |