Table 3.
Phylum/Genus | Manual Extraction | Pumping | |||
---|---|---|---|---|---|
n (%) | Relative Abundance | n (%) | Relative Abundance | p-Value 1 | |
Firmicutes | |||||
Streptococcus | 8 (100%) | 23.94 (14.22–42.83) | 8 (100%) | 37.49 (10.13–55.44) | 0.88 |
Staphylococcus | 8 (100%) | 20.36 (2.74–22.82) | 8 (100%) | 8.26 (2.37–14.22) | 0.16 |
Veillonella | 5 (63%) | 0.21 (0.00–1.44) | 7 (88%) | 0.86 (0.25–2.51) | 0.40 |
Gemella | 4 (50%) | 0.10 (0.00–0.40) | 6 (75%) | 0.48 (0.20–0.68) | 0.36 |
Paenibacillus | 8 (100%) | 0.19 (0.17–0.20) | 8 (100%) | 0.14 (0.11–0.16) | 0.17 |
Clostridium | 8 (100%) | 0.13 (0.09–0.20) | 6 (75%) | 0.17 (0.11–0.19) | 1.00 |
Bacillus | 7 (88%) | 0.18 (0.05–0.39) | 7 (88%) | 0.07 (0.06–0.14) | 0.56 |
Granulicatella | 1 (13%) | <0.00 | 4 (50%) | 0.03 (0.00–0.27) | 0.10 |
Leuconostoc | 1 (13%) | <0.00 | 4 (50%) | 0.03 (0.00–0.17) | 0.11 |
Actinobacteria | |||||
Rothia | 8 (100%) | 3.27 (0.72–6.51) | 8 (100%) | 1.60 (1.26-4.30) | 0.75 |
Corynebacterium | 8 (100%) | 0.39 (0.28-–0.73) | 7 (88%) | 0.16 (0.08-1.04) | 0.44 |
Cellulomonas | 4 (50%) | 0.13 (0.00–0.37) | 5 (63%) | 0.09 (0.00-0.22) | 0.87 |
Streptomyces | 4 (50%) | 0.09 (0.00–0.26) | 5 (63%) | 0.13 (0.00-0.17) | 0.87 |
Actinomyces | 5 (63%) | 0.06 (0.00–0.20) | 4 (50%) | 0.06 (0.00-0.54) | 0.87 |
Proteobacteria | |||||
Acinetobacter | 5 (63%) | 0.34 (0.00–2.07) | 6 (75%) | 0.28 (0.05–1.00) | 0.87 |
Sphingomonas | 6 (75%) | 0.34 (0.05–0.86) | 4 (50%) | 0.02 (0.00–0.12) | 0.21 |
Pseudomonas | 6 (75%) | 0.09 (0.03–0.42) | 7 (88%) | 0.58 (0.15–1.18) | 0.23 |
Erwinia | 2 (25%) | 0.00 (0.00–0.05) | 3 (38%) | 0.00 (0.00–0.13) | 0.65 |
Unclassified genera | 8 (100%) | 19.49 (14.23–27.96) | 8 (100%) | 15.82 (14.18–28.15) | 0.80 |
1 Kruskal–Wallis rank tests.