Table 2.

Relative expression of major expressed family members in Cluster I and II.

No. 1	Mature miRNAs	T2 2	T3 3	T4 4	T5 5	T6 6
1	ssa-let-7b-3p	−1.02 *	−0.39	−0.52	−1.29 *	−0.80
2	ssa-miR-20b-5p	−0.61	−0.82	−0.92	−0.98	−1.23 *
3	ssa-miR-30a-3-4-3p	−0.37	−0.54	−0.93	−0.66	−1.05 *
4	ssa-miR-125b-1-3p	−0.74	−1.18 *	−1.51 *	−1.38 *	−1.62 *
5	ssa-miR-130d-2-5p	−0.63	−1.30	−1.30	−1.38 *	−1.26 *
6	ssa-miR-135a-3p	−0.70	−0.46	−0.75	−0.77	−1.63 *
7	ssa-miR-192a-5p	−0.87	−1.67	−4.44 *	−3.16 *	−5.24 *
8	ssa-miR-194a-5p	−2.06	−3.01 *	−4.02 *	−3.22 *	−5.17 *
9	ssa-miR-196a-5p	−0.36	−0.13	−0.89	−0.49	−1.00 *
10	ssa-miR-200ae-3p	−0.69	−3.12 *	−4.40 *	−2.90 *	−5.60 *
11	ssa-miR-200b-3p	−1.54	−2.85 *	−3.91 *	−3.89 *	−5.07 *
12	ssa-miR-203a-3p	0.96	-0.85	−1.25 *	−0.39	−1.16 *
13	ssa-miR-205b-5p	1.29	−0.99	−1.80 *	−1.46 *	−3.05 *
14	ssa-miR-222b-5p	−0.90	−0.63	−0.75	−1.24 *	−1.00
15	ssa-miR-301a-5p	−1.07	−1.59	−2.00 *	−2.37 *	−1.69 *
16	ssa-miR-375-3p	−0.58	−0.40	−1.02 *	−0.07	−0.90
17	ssa-miR-429ab-3p	−0.60	−1.63	−4.08 *	−2.48 *	−5.23 *
18	ssa-miR-430b-5p	−0.84	−0.61	−1.51 *	−1.88 *	−1.71 *
19	ssa-miR-449ab-5p	−0.82	−1.44	−2.57 *	−1.98	−4.44 *
20	ssa-miR-722-3p	−0.26	−0.79	−1.61 *	−0.65	−1.36 *
21	ssa-miR-8162-5p	−0.79	−0.97	−1.20 *	−0.99	−0.79
22	ssa-miR-novel-2-5p	−1.11	−1.48 *	−2.35 *	−1.51 *	−2.42 *
23	ssa-miR-novel-15-3p	−0.78	−1.32 *	−1.55 *	−0.96	−1.02 *
24	ssa-miR-1-3p	−0.05	−1.24	0.15	−1.31 *	−0.99
25	ssa-miR-15b-3p	−0.48	−0.22	−0.61	−1.30 *	−0.22
26	ssa-miR-30a-2-3p	−1.11 *	−0.73	−0.94	−0.97	−0.85
27	ssa-miR-92a-1-2-5p	−1.01 *	−0.21	−0.58	−0.42	−0.18
28	ssa-miR-106b-3p	−0.86	−0.46	−0.97	−1.56 *	−0.45
29	ssa-miR-125a-1-3p	−1.61 *	−0.37	−0.02	−0.26	−0.41
30	ssa-miR-133-4-5p	−0.95	−1.26	−0.72	−1.76	−1.19 *
31	ssa-miR-144-3p	−0.40	−0.10	0.03	−1.53 *	0.69
32	ssa-miR-144-5p	−0.80	−0.38	−0.33	−2.35 *	0.42
33	ssa-miR-301b-5p	−1.17 *	−0.65	−0.26	−1.02 *	−0.38
34	ssa-miR-451-3p	−0.96	−1.01 *	−0.86	−1.68 *	0.27
35	ssa-miR-730a-5p	−0.37	−0.11	0.10	−2.89 *	0.50
36	ssa-miR-2188-3p	−0.30	0.37	0.68	−1.33 *	0.99
37	ssa-miR-novel-12-5p	−0.77	−0.38	−0.69	−1.05 *	−0.29

¹ Number of DE miRNAs. The table shows only the major expressed mature miRNAs derived from a given precursor in Cluster I (1–23) and Cluster II (24–37) except miRNA-144 where both 5p and 3p were equally expressed. All values are log2 fold changes relative to T1. ² Halfway through light treatment. ³ Three quarters into the light treatment period. ⁴ One day prior to seawater transfer (SWT). ⁵ One-week post SWT. ⁶ One-month post SWT. Asterisk (*) indicate expression changes that are significant.