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. 2020 Sep 16;8(9):1425. doi: 10.3390/microorganisms8091425

Table 2.

Primers and conditions used for the amplification of the mcr genes.

Target Primer Sequence (5′–3′) Amplicon Size (bp) Conditions
mcr-1 mcr-1-Fw CGGTCAGTCCGTTTGTTC 309 20 cycles of amplification at 94 °C for 30 s, 58 °C for 90 s, 72 °C for 1 min and final 72 °C for 10 min
mcr-1-Rv CTTGGTCGGTCTGTAGGG
mcr-2 mcr-2-Fw TGTTGCTTGTGCCGATTGGA 567 33 cycles of amplification at 95 °C for 3 min, 65 °C for 30 s, 72 °C for 1 min and final 72 °C for 10 min.
mcr-2-Rv AGATGGTATTGTTGGTTGCTG
mcr-3 mcr-3-Fw TTGGCACTGTATTTTGCATTT 542 30 cycles of amplification at 95 °C for 30 s, 50 °C for 30 s, 72 °C for 45 s and final 72 °C for 7 min.
mcr-3-Rv TTAACGAAATTGGCTGGAACA
mcr-4 mcr-4-Fw ATTGGGATAGTCGCCTTTTT 487 20 cycles of amplification at 94 °C for 30 s, 58 °C for 90 s, 72 °C for 1 min and final 72 °C for 10 min
mcr-4-Rv TTACAGCCAGAATCATTATCA
mcr-5 mcr-5-Fw ATGCGGTTGTCTGCATTTATC 1644 30 cycles of amplification at 95 °C for 30 s, 50 °C for 30 s, 72 °C for 95 s and final 72 °C for 5 min.
mcr-5-Rv TCATTGTGGTTGTCCTTTTCTG

Fw: Forward, Rv: Reverse.