Table 2.

Data summary and alignment statistics with reference genome.

Sample ID	Clean Reads	Clean Data Size(bp)	Mapped Reads	Mapping Rate (%)	Uniquely Mapped Reads	Uniquely Mapping Rate (%)	Bisulfite Conversion Rate (%)
A1	235,240,966	29,405,120,750	146,748,774	62.38	120,561,967	51.25	99.83
A2	221,903,100	27,737,887,500	138,682,431	62.50	114,085,412	51.41	99.82
A3	252,389,374	31,548,671,750	158,828,900	62.93	130,699,039	51.78	99.83
C1	214,743,374	26,842,921,750	134,186,828	62.49	109,061,960	50.79	99.87
C2	223,167,750	27,895,968,750	141,594,447	63.45	114,184,023	51.17	99.90
C3	240,490,792	30,061,349,000	151,604,875	63.04	124,088,420	51.60	99.89