Table 2.
Data of WGS performance.
| Sample_ID | Total Rawreads | Q30 Rawreads | Total Trimreads | Q30 Trimreads | Sequence Lenght | %GC | Coverage |
|---|---|---|---|---|---|---|---|
| 2018.AZ.6050.8.2 | 5,070,316 | 84.71 | 3,686,844 | 92.72 | 7210 | 55.5 | 775.17 |
| 2018.AZ.6050.8.6 | 20,142 | 85.72 | 14,560 | 93.05 | 6736 | 55.4 | 5.87 |
| 2018.AZ.6050.8.7 | 2,483,214 | 84.95 | 1,705,664 | 93.09 | 7067 | 55.7 | 369.24 |
| 2018.AZ.6050.8.10 | 1,560,834 | 84.63 | 1,114,066 | 92.82 | 7006 | 55.6 | 88.12 |
| 2018.AZ.6050.8.11 | 924,066 | 85.86 | 832,502 | 93.11 | 7039 | 55.7 | 63.06 |
| 2019.AZ.4671.2.1 | 458,770 | 95.47 | 440,458 | 97.71 | 7237 | 55.1 | 1678.89 |
| 2019.AZ.5758.1.4 | 1,568,372 | 86.03 | 1,469,764 | 92.5 | 7107 | 56 | 54.62 |
| 2019.AZ.5758.1.5 | 767,482 | 93.91 | 730,209 | 97.93 | 7024 | 55.7 | 8.39 |
| 2019.AZ.6232.1.4 | 1,224,774 | 84.32 | 1,124,515 | 93.19 | 7042 | 55.3 | 8.58 |
| 2019.AZ.6232.1.6 | 488,730 | 92.35 | 451,677 | 97.72 | 7206 | 55.4 | 7.49 |
| 2019.AZ.6234.1.1 | 844,282 | 94.76 | 806,030 | 97.95 | 7087 | 55.6 | 174.86 |
| 2019.AZ.6360.1.2 | 444,820 | 90.58 | 423,140 | 97.63 | 7191 | 55.2 | 130.17 |