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. 2020 Oct 16;11:5248. doi: 10.1038/s41467-020-18904-9

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© The Author(s) 2020

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 5 — The evaluation was based on the experimentally determined abundance changes of the systematically quantified proteins (every day by every laboratory) between controlled samples A and B (n = 4565) using three technical replicates. In the upper panels, the distribution of deviation from theoretical protein abundance changes for the three organisms (in %) was plotted for each laboratory through boxplots with center line, box bounds, and whiskers representing the median, 1st/3rd quartile, and 10th/90th percentile, respectively. Horizontal dashed lines were added at 25% relative deviation, as a reference value. In the lower panels, the distribution of the coefficients of variation obtained on the determined protein abundance changes for the three organisms across the various evaluation days (CV in %) was plotted for each laboratory through boxplots with center line, box bounds, and whiskers representing the median, 1st/3rd quartile, and 10th/90th percentile, respectively. Horizontal dashed lines were added at 25% CV, as a reference value. Source data are provided as a Source Data file.