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•
IFN response (IRF-1, CXCL-9, -10, −11)
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•
Chemokine receptors (CXCR3)
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•
Ag processing/presentation (β2 microglobulin, TAP transporters, MHC-I and II, CD74)
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•
TCR signalling (CD3D)
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•
Inflammation (IL-15, IL-32, IL-6R, VAV1, complement)
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•
Cytotoxicity (Granzyme B and TNFSF10)
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•
CT Ags (ZNF165, CEP55, ATAD2, MAGEA3, CTAGE5, TTK, PBK, PRAME, CXorf48)
•BRCA1-disruption
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-
•
High hypoxia
-
•
Myofibroblasts
-
•
Vascular endothelial cells
-
•
Pericytes
-
•
Extracellular matrix genes
•Angiogenesis genes (VEGF)
|
-
•
WNT/β-catenin signalling
-
•
Cell cycle genes,
-
•
Extracellular matrix genes
-
•
Low expression of immune cell genes (MHC-I and II), mucins (MUC-1, -16), kallikreins
-
•
Low E-cadherin
-
•
CXCR6
•Angiogenesis genes (VEGF, ETBR, ET-1)
|