Antibodies
|
Anti‐ERK1/2, Rabbit |
CST |
9102 |
Anti‐ERK1/2, Mouse |
CST |
4696 |
Anti‐phospho‐ERK1/2(Y202/Y204), Rabbit |
CST |
4370 |
Anti‐MEK1/2, Mouse |
CST |
4694 |
Anti‐phospho‐MEK1/2(S217/S221), Rabbit |
CST |
9121 |
Anti‐CRAF, Mouse |
CST |
12552 |
Anti‐BRAF, Mouse |
Invitrogen |
MA5‐15495 |
Anit‐panRAS, Mouse |
Cytoskeleton |
AESA02 |
Anti‐phospho‐AKT(S473) |
CST |
4060 |
Anti‐beta‐Actin |
Sigma‐Aldrich |
A2228 |
Anti‐Tubulin |
CST |
3873 |
Anti‐GAPDH |
CST |
2118 |
IRDye 800CW Donkey anti‐Rabbit IgG |
Licor |
925‐32213 |
IRDye 800CW Donkey anti‐Mouse IgG |
Licor |
926‐32212 |
IRDye 680RD Donkey anti‐Rabbit IgG |
Licor |
926‐68073 |
IRDye 680RD Donkey anti‐Mouse IgG |
Licor |
925‐68072 |
Chemicals, peptides, and recombinant proteins
|
Amphiregulin |
Peprotech |
100‐55B |
EGF |
Peprotech |
AF‐100‐15 |
FGF |
Peprotech |
100‐18B |
HGF |
Peprotech |
100‐39 |
IGF‐I |
Peprotech |
100‐11 |
PDGF‐AB |
Peprotech |
100‐00AB |
ARS‐853 |
MedChemExpress |
HY‐19706 |
PD0325901 |
Selleck Biochemicals |
S1036 |
SCH772984 |
Selleck Biochemicals |
S7101 |
Blasticidin |
Corning |
30‐100‐R1 |
Bovine serum albumin |
Sigma‐Aldrich |
A7906 |
Collagen I, rat tail |
Life Technologies |
A10483‐01 |
Dextrose |
Fisher |
C6H1206 |
l‐Glutamine |
Life Technologies |
25030‐081 |
Puromycin dihydrochloride |
Sigma‐Aldrich |
P8833 |
DMEM |
Life Technologies |
11965‐092 |
Fetal bovine serum |
Gemini Bio‐products |
100‐106 |
Penicillin streptomycin |
Life Technologies |
15070‐063 |
0.25% Trypsin‐EDTA |
Life Technologies |
25200‐056 |
Tris Base |
Fisher |
BP152 |
Glycine (Crystalline Powder) |
Fisher |
BP381 |
Sodium dodecyl sulfate (SDS), Micropellets |
Fisher |
BP8200500 |
Ponceau S solution, suitable for electrophoresis, 0.1% (w/v) in 5% acetic acid, 1L |
Sigma‐Aldrich |
P7170‐1L |
Bromophenol blue |
Sigma‐Aldrich |
B5525 |
Dithiothreitol |
Fisher |
BP172 |
Critical commercial assays
|
Amaxa MEF 2 Nucleofector kit |
Lonza |
VPD‐1005 |
Experimental models: cell lines
|
RAS‐less MEF (Mouse Embryonic Fibroblast) cell lines with transduced human RAS or BRAFV600E |
Gift from Dom Esposito, Frederick National Laboratory |
|
HRASWT EKAR3 |
This paper |
Available on request |
KRAS4BWT EKAR3 |
This paper |
Available on request |
NRASWT EKAR3 |
This paper |
Available on request |
KRASG12C EKAR3 |
This paper |
Available on request |
KRASG12D EKAR3 |
This paper |
Available on request |
KRASG12V EKAR3 |
This paper |
Available on request |
KRASQ61R EKAR3 |
This paper |
Available on request |
BRAFV600E EKAR3 |
This paper |
Available on request |
Recombinant DNA
|
Plasmid: pPBJ‐EKAR3nls‐puro |
Sparta et al (2015) |
Addgene # forthcoming |
Software and Algorithms
|
NIS Elements AR ver. 4.20 |
Nikon |
RRID:SCR_014329
|
Bio‐Formats ver. 5.1.1 (May 2015) |
OME |
RRID:SCR_000450
|
uTrack 2.0 |
Jaqaman et al (2008) |
http://www.utsouthwestern.edu/labs/danuser/software/
|
MATLAB |
Mathworks |
SCR_001622 |
Other
|
Glass‐Bottom Plates, #1.5 cover glass |
Cellvis |
P24‐1.5H‐N, P96‐1.5H‐N |
12% Mini‐PROTEAN® TGX™ Precast Protein Gels, 15‐well, 15 μl |
Bio‐Rad |
4561046 |
SuperSep Phos‐tag gels (50 μmol/l), 12.5%, 17 wells |
Wako‐Chem |
195‐17991 |
GE Healthcare Amersham™ Protran™ NC Nitrocellulose Membranes: Rolls, 0.1 μm pore |
Fisher |
45‐004‐000 |