Figure 2.

This overview illustrates the components and steps of Knowledge-based Identification of Pathway Enzymes (KIPEs). Three different modes allow the screening of peptide, transcript, or genome sequences for candidate sequences. Bait sequences and information about functionally relevant features (blue) are supplied by the user. Different modules of KIPEs (light green) are executed consecutively depending on the type of input data. Intermediate results and the final output (dark green) are stored to keep the process transparent.