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. Author manuscript; available in PMC: 2021 Oct 1.
Published in final edited form as: Atherosclerosis. 2020 Aug 29;311:20–29. doi: 10.1016/j.atherosclerosis.2020.08.013

Table 2.

cis eQTLs in GWAS CAD SNPs in the vicinity of ZEB2 in STARNET (p < 0.05 is considered statistically significant).

SNP id SNP chromosome location Reference allele CAD risk allele Tissue Target gene name Beta p value FDR GTEx p value GTEx eQTL tissue
rs1830321 chr2:145067988 C T AOR ZEB2 0.1727 0.00697 0.8931 0.0001 Aorta
rs1830321 chr2:145067988 C T SF TEX41 −0.1916 0.00199 0.4918 - -
rs6740731 chr2:144513025 G A/C/T MAM AC009951.1 0.2425 0.00445 0.7921 0.000011 Skelet. mu
rs17678683 chr2:144528992 T G AOR GTDC1 −0.2844 0.00879 0.9435 0.0000012 Skelet. mu
rs17678683 chr2:144528992 T G VAF ZEB2 0.2920 0.00994 0.9530 -
rs17678683 chr2:144528992 T G SF ZEB2 0.3380 0.00180 0.4978 -

There were no cis eQTLs identified for rs2252641. These results are also presented in Figure 2. The final 2 columns are data derived from the GTEx study for the same SNPs/eQTLs. Skelet. Mu, skeletal muscle.