Table 4.
ProbeID | Gene Symbol(s) | Coordinate | Exposurea | % Differential Methylation (Mean ± SEM)b | p-valuec | Exposure Regression Coefficientc | Dioxin/Furan/PCB Associationd |
---|---|---|---|---|---|---|---|
cg00999904 | ALLC | chr2:3704751 | PCDDs | −4.64 ± 0.21 | 1.05E-09 | −1.8964 | TCDD |
cg11354991 | BBS4, HIGD2B | chr15:72978685 | PCDDs | 0.09 ± 0.01 | 6.04E-09 | 0.8172 | TCDD, PCB52, PCB180 |
cg03510117 | CYCS | chr7:25164991 | PCDDs | 0.37 ± 0.01 | 3.01E-08 | 0.6423 | TCDD, PCB153 |
cg06169091 | IGSF21 | chr1:18678286 | PCDDs | −2.49 ± 0.16 | 3.08E-08 | −0.5569 | |
cg21401636 | KIF5Ce | chr2:149629217 | PCDDs | −3.73 ± 0.30 | 1.88E-08 | −0.6405 | TCDD |
cg03459668 | RAB11FIP3 | chr16:545622 | PCDDs | −2.86 ± 0.14 | 2.26E-08 | −0.4876 | TCDD, PCB126 |
cg07303330 | TAAR2 | chr6:132945515 | PCDDs | −0.88 ± 0.06 | 7.85E-09 | −0.9439 | |
cg26787894 | CD83 | chr6:14117621 | PCDFs | 0.29 ± 0.02 | 3.39E-08 | 0.4943 | TCDD |
cg06242879 | ERBB3, PA2G4 | chr12:56497745 | PCDFs | 0.36 ± 0.04 | 6.13E-09 | 0.3756 | TCDD, PCB77 |
cg23269663 | BCL3 | chr19:45250480 | cPCBs | −0.51 ± 0.03 | 5.15E-08 | −0.2829 | TCDD |
CpGs are listed in order of exposure category and gene symbol. Individual exposures with ≥60% participants below the limit of detection
were excluded from the exposure groups with the exception of the ΣDioxins.
Exposure groups: ΣDioxins = sum of 28 dioxin and dioxin-like compounds, PCDDs = polychlorinated dibenzodioxins (n=7), PCDFs = polychlorinated dibenzofurans (n= 5), cPCBs = non-ortho subsituted PCBs (n=2), mPCBs = mono-ortho substituted PCBs (n=7).
Differential methylation was calculated by subtracting methylation in lowest exposure quartile from the highest.
Robust linear regression models were adjusted for age, race, sex, smoking status, bisulfite-conversion batch, and estimated percentages of CD4+ and CD8+ T-cells, CD19+ B-cells, monocytes, granulocytes, and natural killer cells.
Genes associated with dioxin, furan, or PCB exposure based on the 2019 Comparative Toxicogenomics Database.
Effect modification by race was detected. See Results 3.6 and Supplemental Table 3 for details.