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. Author manuscript; available in PMC: 2020 Oct 20.
Published in final edited form as: J Chem Theory Comput. 2010 Aug 30;6(9):2978–2989. doi: 10.1021/ct100334n

Figure 5.

Figure 5.

Binding of new hits (compounds 6 and 8) into the Hsp90 dimer. Lowest binding energies were obtained with a MD representative conformation (cluster 2, time = 65 200 ps). The protein complex is shown in a ribbon representation colored by a chain with the putative communication hot spot residues colored in red. The Hsp90 C-terminal binding pocket (pocket A) is shown as an orange line mesh and protein–ligand hydrogen bonds are represented with spheres.