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. 2020 Jul 29;28(11):1615–1623. doi: 10.1038/s41431-020-0697-6

Table 2.

Training and running times of our methods. Training includes training a model on the entire synthetic dataset. Running involves genotype-correcting a single VCF file (96,000 variants) with a pre-trained model. The benchmarks were run on an Intel i5-7200U CPU @ 2.5 GHz.

Training time
Logistic regression 67 s
XGBoost 552 s
Training time
Logistic regression 0.03 s
XGBoost 0.67 s
Restricted Bayesian 0.12 s