Table 1.
BLAST results against available PDB structures for selection of the modeling method, template selection for the structures of 9b and ORF14 proteins.
Sl no. | Protein name and UniProtKB accession number | Length (aa residue) | PDB Template (S) | Identity with template (%) | E-value | Query coverage | The final structure/modeling method selected |
---|---|---|---|---|---|---|---|
1 | ORF9b protein (P0DTD2) | 97 | 2CME_B (79 aa) | 70.93% | 2e-34 | 89% | Comparative modelling |
2 | ORF14 protein (P0DTD3) | 73 | 3A32_A | 39.13% | 9.0 | 31% | Ab initio modelling |