Table 1.
Table-level mapping between OMOP Common Data Model and Mayo Clinic electronic health records.
| OMOPa Common Data Model and Mayo Clinic clinical data repository |
Number of records | Vocabulary | Natural language processing cTAKES-type system | |
| Person | ||||
|
|
Demographics | 45,613 | —b | — |
| Condition | ||||
|
|
Diagnosis | 9,712,736 |
|
|
|
|
Procedures | 13,014,264 | CPTe | Procedure |
| Measurement | ||||
|
|
Lab | 15,719,203 | Local code system | Lab |
|
|
Vital Signs | — | — | VitalSigns |
| Drug_Exposure | ||||
|
|
DrugExposure | — | UMLSf | Medication |
| Note | ||||
|
|
Clinical notes | 68,198,499 | — | — |
aOMOP: Observational Medical Outcomes Partnership.
bThere is no equivalent or no system is used for the equivalent concept.
cICD-9-CM: International Classification of Diseases, Ninth revision, Clinical Modification.
dICD-10-CM: International Classification of Diseases, Tenth revision, Clinical Modification.
eCPT: Current Procedural Terminology.
fUMLS: Unified Medical Language System.