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. 2020 Sep 24:1–16. doi: 10.1080/07391102.2020.1824816

Table 1.

Evaluation of the binding affinity (kcal/mol) and interacting residues in the SARS-CoV-2- RBD/drug complexes.

Namedrug binding affinity(kcal/mol) HB-AAsa NH-AAsb
Diammonium Glycyrrhizinate −11.7545 Tyr449,Gln493, Ser494, Gly496,Gln498, Tyr505 Tyr453,Gly485,Phe486, Asn487,Tyr489,Tyr495, Asn501
Digitoxin −11.2534 Lys403,Asp406,Gln409, Val417,Gly485 Arg408,Ile418,Tyr453, Cys488,Glu484,Gly485, Phe486,Asn487,Cys488, Tyr489
Ivermectin −10.8697 Tyr453,Leu492,Gln493, Ser494,Asn502 Lys403,Tyr449,Lys452, Phe490,Tyr495,Gly502, Tyr505
Rapamycin (Sirolimus) −10.5657 Lys403,Asp406,Arg408, Tyr453,Tyr489, Glu493, Ser494 Glu409,Gly416,Val417, Ile418,Tyr421,Tyr449, Leu455,Phe456,Tyr495, Gly496
Rifaximin −10.5365 Tyr449,Tyrs453,Gln493, Ser494 Lys403,Leu455,Tyr495, Gly496,Tyr505
Amphotericin B −10.5021 Tyr449,Lys452,Tyr453, Gln493,Ser494 Leu455,Phe456,Glu484, Phe490

aHydrogen bonds forming Amino Acids, bNon-bonded contacts forming Amino Acids.