Anti-GFP (Green Fluorescent Protein) pAb |
MBL International |
Cat#598; RRID:AB_591819 |
Goat Anti-rabbit HRP |
Pierce |
Cat#1858415 |
Bacterial and Virus Strains |
E. coli: Alpha-Select Silver |
Bioline |
Cat#BIO-85026 |
E. coli: BL21(DE3) |
Novagen |
Cat#69387-3 |
E. coli: XL1-Blue |
Stratagene |
Cat#200249 |
E. coli: BTH101 |
EuroMedex |
Cat#EUB001 |
E. coli: DAP (diaminopimelic acid) auxotroph used for conjugation |
W. Metcalf, Univ. of Illinois, Urbana [58] |
WM3064 |
Asticcacaulis biprosthecum C19 |
[70] |
ATCC: 27554 |
Mutant strains, see Table S3
|
|
|
Deposited Data |
C. crescentus bacA/BacA gene and protein sequences |
Integrated Microbial Genomes: https://img.jgi.doe.gov
|
Genome Name: Caulobacter crescentus CB15; Genome ID: 637000061; Gene ID: 637087916; Amino acids: 161 |
C. crescentus bacB/BacB gene and protein sequences |
Integrated Microbial Genomes: https://img.jgi.doe.gov and [12] |
Genome Name: Caulobacter crescentus CB15; Genome ID: 637000061; Gene ID: 637089074; Amino acids: 180 |
Asticcacaulis biprosthecum bacA/BacA gene and protein sequences |
Integrated Microbial Genomes: https://img.jgi.doe.gov
|
Genome Name: Asticcacaulis biprosthecum C19, ATCC 27554 Genome ID: 651285000 Gene ID: 651319016 Amino acids: 181 |
Structural coordinates of C. crescentus BacA |
[51] |
PBD 2N3D |
Oligonucleotides |
Primers for construct generation and sequencing, see Table S4
|
Eurofins |
N/A |
Recombinant DNA |
pMR10 |
R. Roberts and C. Mohr |
N/A |
pNPTS138 |
M.R.K. Alley |
N/A |
pNPTS139 |
M.R.K. Alley |
N/A |
pGFPC-1 |
[59] |
N/A |
pVENC-4 |
[59] |
N/A |
pKT25 |
EuroMedex |
Cat#EUP-25C |
pKNT25 |
EuroMedex |
Cat#EUP-25N |
pUT18 |
EuroMedex |
Cat#EUP-18N |
pUT18C |
EuroMedex |
Cat#EUP-18C |
pKT25-zip |
EuroMedex |
Cat#EUP-25Z |
pUT18C-zip |
EuroMedex |
Cat#EUP-18Z |
pET28a+ |
Novagen |
Cat#69864 |
Cloned vectors, see Table S2
|
|
|
Software and Algorithms |
Jalview |
[61] |
https://www.jalview.org/ |
SWISS-MODEL |
[50] |
https://swissmodel.expasy.org/ |
ESPript |
[62] |
http://espript.ibcp.fr/ESPript/ESPript/ |
FIJI |
[64] |
https://fiji.sc/ |
MicrobeJ |
[65] |
https://www.microbej.com/ |
TrackMate |
[66] |
https://imagej.net/TrackMate |
R |
[67] |
https://www.r-project.org/ |
ggplot2 |
[68] |
https://cran.r-project.org/package=ggplot2 |
ggsignif |
[69] |
https://cran.r-project.org/package=ggsignif |