Table 1.
PCR results of 33 known respiratory pathogen and family-wide PCR detection for 5 PUIs identified.
| Specimen Type | Known pathogen detected | 3 CoV family-wide PCRs (Sequencing result) | Pan-Influenza A PCR (Sequencing result) |
|---|---|---|---|
| PATIENT #1 | |||
| Throat Swab | Influenza A virus | Negative | Positive (Influenza A virus) |
| Moraxella catarrhalis | |||
| Haemophilus influenzae | |||
| Suction | Influenza A virus | Negative | Positive (Influenza A virus) |
| Moraxella catarrhalis | |||
| Haemophilus influenzae | |||
| PATIENT #2 | |||
| Nasopharyngeal and throat swabs | Respiratory Syncytial Virus A/B | Negative | Negative |
| Staphylococcus aureus | |||
| Klebsiella pneumoniae | |||
| Sputum | Respiratory Syncytial Virus A/B Influenza C virus | Negative | Negative |
| Staphylococcus aureus | |||
| Klebsiella pneumonia | |||
| Haemophilus influenzae | |||
| PATIENT #3 | |||
| Nasopharyngeal and throat swabs | Haemophilus influenzae | Negative | Negative |
| Sputum | Haemophilus influenzae | Negative | Negative |
| PATIENT #4 | |||
| Nasopharyngeal and throat swabs | Coronavirus OC43 | Positive—Protocol W | Negative |
| Haemophilus influenzae | Positive—Protocol Q | ||
| Positive—Protocol C (Coronavirus OC43) |
|||
| PATIENT #5 | |||
| Nasopharyngeal and throat swabs | Staphylococcus aureus | Positive—Protocol Q | Negative |
| Haemophilus influenzae | Positive—Protocol C (SARS-CoV-2) |
||
| Sputum | Staphylococcus aureus | Positive—Protocol Q | Negative |
| Haemophilus influenzae | Positive—Protocol C (SARS-CoV-2) |
||